RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 TMEM51Q9NW97 253 aa5.35□□□□□ -1.55
SKP1-208ENST00000521216 ZNF69Q9UC07 566 aa5.35□□□□□ -1.55
SKP1-208ENST00000521216 AASSQ9UDR5 926 aa5.35□□□□□ -1.55
SKP1-208ENST00000521216 TNFRSF18Q9Y5U5 241 aa5.35□□□□□ -1.55
SKP1-208ENST00000521216 FAM90A10PA6NDY2 464 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 TTC36A6NLP5 189 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 LRRC53A6NM62 1247 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 B4E171 279 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 LDLRAD4O15165 306 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 SPARCP09486 303 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 MYF6P23409 242 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 HOXA11P31270 313 aaPredicted RBP5.34□□□□□ -1.55
SKP1-208ENST00000521216 ARL1P40616 181 aaPredicted RBP5.34□□□□□ -1.55
SKP1-208ENST00000521216 TSPAN7P41732 249 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 PGGT1BP53609 377 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 EIF3BP55884 814 aaKnown RBP5.34□□□□□ -1.55
SKP1-208ENST00000521216 GRIK3Q13003 919 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 HNF4GQ14541 408 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 DCAF6Q58WW2 860 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 TMEM163Q8TC26 289 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 HDAC2Q92769 488 aaKnown RBP5.34□□□□□ -1.55
SKP1-208ENST00000521216 SMYD2Q9NRG4 433 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 CYSLTR2Q9NS75 346 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 ORC3Q9UBD5 711 aaPredicted RBP5.34□□□□□ -1.55
SKP1-208ENST00000521216 MYO6Q9UM54 1294 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 A4GNTQ9UNA3 340 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 LSM4Q9Y4Z0 139 aaKnown RBP5.34□□□□□ -1.55
SKP1-208ENST00000521216 A3GALT2U3KPV4 340 aa5.34□□□□□ -1.55
SKP1-208ENST00000521216 CACNA1IQ9P0X4 2223 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 TFP02787 698 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 GNLYP22749 145 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 HOXD3P31249 432 aaPredicted RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 CPOXP36551 454 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 NUDT6P53370 316 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 RARSP54136 660 aaKnown RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 FOXD4Q12950 439 aaPredicted RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 KRT32Q14532 448 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 RNPS1Q15287 305 aaKnown RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 TBCEQ15813 527 aaPredicted RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 GSTA3Q16772 222 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 HAUS3Q68CZ6 603 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 FAM180BQ6P0A1 224 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 INO80CQ6PI98 192 aaPredicted RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 TRILQ7L0X0 811 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 NOXA1Q86UR1 476 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 CCDC105Q8IYK2 499 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 PELI3Q8N2H9 469 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 TDRD7Q8NHU6 1098 aaKnown RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 NR1H4Q96RI1 486 aaPredicted RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 PIP5K1AQ99755 562 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 DCLK3Q9C098 648 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 OLA1Q9NTK5 396 aaKnown RBP5.33□□□□□ -1.56
SKP1-208ENST00000521216 IL36RNQ9UBH0 155 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 RAI2Q9Y5P3 530 aa5.33□□□□□ -1.56
SKP1-208ENST00000521216 A0A1W2PQM1 296 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 EIF3CLB5ME19 914 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 NPIPB11E5RHQ5 1161 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 OAZ2O95190 189 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 MT-CYBP00156 380 aaPredicted RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 HSPA1AP0DMV8 641 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 HSPA1BP0DMV9 641 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 ETFAP13804 333 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 ARRB2P32121 409 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 PIGAP37287 484 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 MLH1P40692 756 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 PCYT1AP49585 367 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 LINC00205P59089 165 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 CTTNQ14247 550 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 TXNDC8Q6A555 127 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 TYW3Q6IPR3 259 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 SFTPA2Q8IWL1 248 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 PRR26Q8N8Z3 221 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 PPHLN1Q8NEY8 458 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 ARRDC2Q8TBH0 407 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 ERGIC1Q969X5 290 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 PABPC5Q96DU9 382 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 ZNF570Q96NI8 536 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 CAMK1GQ96NX5 476 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 GLIS2Q9BZE0 524 aaPredicted RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 CLK4Q9HAZ1 481 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 PLK2Q9NYY3 685 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 CISD1Q9NZ45 108 aaKnown RBP5.32□□□□□ -1.56
SKP1-208ENST00000521216 MKLN1Q9UL63 735 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 PAM16Q9Y3D7 125 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 SCINQ9Y6U3 715 aa5.32□□□□□ -1.56
SKP1-208ENST00000521216 KDM3AQ9Y4C1 1321 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 A0A0U1RQF3 1178 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 SEC14L5O43304 696 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 ITGAXP20702 1163 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 MAN1A1P33908 653 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 CDKN2AP42771 156 aaKnown RBP5.31□□□□□ -1.56
SKP1-208ENST00000521216 ABATP80404 500 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 TCTN1Q2MV58 587 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 CCDC30Q5VVM6 783 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 CDC73Q6P1J9 531 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 FBXO46Q6PJ61 603 aaPredicted RBP5.31□□□□□ -1.56
SKP1-208ENST00000521216 LCTLQ6UWM7 567 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 DSTYKQ6XUX3 929 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 OR14A16Q8NHC5 309 aa5.31□□□□□ -1.56
SKP1-208ENST00000521216 ETNPPLQ8TBG4 499 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms