RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 PTGISQ16647 500 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZNF672Q499Z4 452 aaPredicted RBP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 HSP90AB4PQ58FF6 505 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TCEAL5Q5H9L2 206 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 C3orf38Q5JPI3 329 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TTC39AQ5SRH9 613 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ODR4Q5SWX8 454 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CES5AQ6NT32 575 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CYP26C1Q6V0L0 522 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TMEM184AQ6ZMB5 413 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 USP49Q70CQ1 688 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ASCL5Q7RTU5 278 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 DEFB128Q7Z7B8 93 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 UEVLDQ8IX04 471 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SAMD3Q8N6K7 520 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 FAM133AQ8N9E0 248 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 GMCL1P1Q8NEA9 526 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ACER1Q8TDN7 264 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TMEM174Q8WUU8 243 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SEPT8Q92599 483 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ARHGAP45Q92619 1136 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TSR2Q969E8 191 aaKnown RBP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TOP1MTQ969P6 601 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MSLNLQ96KJ4 702 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 NEUROD6Q96NK8 337 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 NEK1Q96PY6 1258 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SPRY4Q9C004 299 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MFSD1Q9H3U5 465 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SLC38A10Q9HBR0 1119 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZIM2Q9NZV7 527 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 COL20A1Q9P218 1284 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SEMA5BQ9P283 1151 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 DKK4Q9UBT3 224 aa3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 NKX1-2Q9UD57 310 aaPredicted RBP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MAGED2Q9UNF1 606 aaPredicted RBP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 HEMK1Q9Y5R4 338 aaPredicted RBP3.12□□□□□ -1.91
ATP6V1C1-204ENST00000518959 DOCK1Q14185 1865 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 A0A1W2PRG0 241 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CFAP69A5D8W1 941 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 EPOPA6NHQ4 379 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 A6NNZ2 444 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 F5H6K3 240 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 IPO8O15397 1037 aaKnown RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MARCH6O60337 910 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SP1P08047 785 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SLC3A2P08195 630 aaKnown RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 STAG3L1P0CL83 205 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TXNP10599 105 aaKnown RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CHRNB1P11230 501 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 BRAFP15056 766 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ACVR2AP27037 513 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 STAT2P52630 851 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ITGA8P53708 1063 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 EPHB1P54762 984 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SHC2P98077 582 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 FMO1Q01740 532 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 KLRC3Q07444 240 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 GIT2Q14161 759 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CNGA2Q16280 664 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZNF528Q3MIS6 628 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CXorf57Q6NSI4 855 aaKnown RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZSCAN25Q6NSZ9 544 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZNF449Q6P9G9 518 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RASGRP2Q7LDG7 609 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TFAP2DQ7Z6R9 452 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RPAINQ86UA6 219 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ERC1Q8IUD2 1116 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CCDC105Q8IYK2 499 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 KCNG4Q8TDN1 519 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 GDPD5Q8WTR4 605 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 SUSD6Q92537 303 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CENPIQ92674 756 aaPredicted RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 VPS50Q96JG6 964 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZNF668Q96K58 619 aaPredicted RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 IWS1Q96ST2 819 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ELOVL1Q9BW60 279 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 FTHL17Q9BXU8 183 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CHST8Q9H2A9 424 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 FAM83DQ9H4H8 585 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 AAMDCQ9H7C9 122 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 CERS4Q9HA82 394 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MCM9Q9NXL9 1143 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MAP3K20Q9NYL2 800 aaKnown RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 AFF4Q9UHB7 1163 aaKnown RBP3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 VPS51Q9UID3 782 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MID2Q9UJV3 735 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 TPCN1Q9ULQ1 816 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 LZTS1Q9Y250 596 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 GRIN2DO15399 1336 aa3.11□□□□□ -1.91
ATP6V1C1-204ENST00000518959 LRRC37A2A6NM11 1700 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ZSWIM8A7E2V4 1837 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 MGAMO43451 1857 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 hCG_2014768A0A024R1R8 64 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 ANKRD62A6NC57 917 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 OR6C75A6NL08 312 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 AQP7P3A6NL99 342 aa3.1□□□□□ -1.91
ATP6V1C1-204ENST00000518959 RSPH10B2B2RC85 870 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms