RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 RPL7AP62424 266 aaKnown RBP3.83□□□□□ -1.8
VPS13B-207ENST00000518569 DSC1Q08554 894 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 NEXNQ0ZGT2 675 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 GPS2Q13227 327 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 HSPB2Q16082 182 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 SOWAHAQ2M3V2 549 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 SLC4A8Q2Y0W8 1093 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 PRAMEF19Q5SWL8 479 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 FAAH2Q6GMR7 532 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 ATF7IPQ6VMQ6 1270 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 GJC3Q8NFK1 279 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 NEK9Q8TD19 979 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 ZC3HAV1LQ96H79 300 aaKnown RBP3.83□□□□□ -1.8
VPS13B-207ENST00000518569 MXRA8Q9BRK3 442 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 HEMGNQ9BXL5 484 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 DCLK3Q9C098 648 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 UBA5Q9GZZ9 404 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 MAF1Q9H063 256 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 USP44Q9H0E7 712 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 ZHX3Q9H4I2 956 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 FAM96BQ9Y3D0 163 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 SCINQ9Y6U3 715 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 UTYO14607 1347 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 TDRD9Q8NDG6 1382 aaKnown RBP3.83□□□□□ -1.8
VPS13B-207ENST00000518569 NISCHQ9Y2I1 1504 aa3.83□□□□□ -1.8
VPS13B-207ENST00000518569 ITIH6Q6UXX5 1313 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 A0A087X0M5 115 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 A0A1B0GVM2 712 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 A0A1B0GX30 115 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 LRRC53A6NM62 1247 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 INAFM1C9JVW0 142 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 USP17L23D6RBM5 183 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 NPIPB11E5RHQ5 1161 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 WNT9BO14905 357 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 LDLRAD4O15165 306 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ITM2AO43736 263 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 KLK8O60259 260 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ATP2C2O75185 946 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 NDUFB4O95168 129 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 TBX18O95935 607 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CBSLP0DN79 551 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CD58P19256 250 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ITGAXP20702 1163 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 AGAP20933 346 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 GPTP24298 496 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CBSP35520 551 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 MLH1P40692 756 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 AMTP48728 403 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CTCFP49711 727 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 GNAQP50148 359 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CCR9P51686 369 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 NUDT6P53370 316 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 PMS2P54278 862 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 HDAC4P56524 1084 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 LINC00205P59089 165 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ABATP80404 500 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 Q0VFX4 171 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 TRAF2Q12933 501 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 SHBQ15464 509 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CCNG2Q16589 344 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 TSTQ16762 297 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 TCTN1Q2MV58 587 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ESCO2Q56NI9 601 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CES5AQ6NT32 575 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CDC73Q6P1J9 531 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 PDXDC1Q6P996 788 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ZNF549Q6P9A3 640 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 DLK2Q6UY11 383 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 TMTC3Q6ZXV5 915 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 RSRC2Q7L4I2 434 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 MB21D2Q8IYB1 491 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 DIS3L2Q8IYB7 885 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 PRR26Q8N8Z3 221 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 TDRD7Q8NHU6 1098 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ETNPPLQ8TBG4 499 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 METTL6Q8TCB7 284 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 GPT2Q8TD30 523 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 ADAMTS15Q8TE58 950 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 HDAC2Q92769 488 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 FBXL8Q96CD0 374 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CAMK1GQ96NX5 476 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 SIN3AQ96ST3 1273 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 MAP7D2Q96T17 732 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 GLIS2Q9BZE0 524 aaPredicted RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 RANBP17Q9H2T7 1088 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 PLEKHA4Q9H4M7 779 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CLK4Q9HAZ1 481 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 CYSLTR2Q9NS75 346 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 OLA1Q9NTK5 396 aaKnown RBP3.82□□□□□ -1.8
VPS13B-207ENST00000518569 PCDHA7Q9UN72 937 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 NFE2L3Q9Y4A8 694 aa3.82□□□□□ -1.8
VPS13B-207ENST00000518569 A0A1B0GVT2 93 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 NPIPB15A6NHN6 443 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 KDM4EB2RXH2 506 aaPredicted RBP3.81□□□□□ -1.8
VPS13B-207ENST00000518569 INSIG1O15503 277 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 SEC14L5O43304 696 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 CLEC3BP05452 202 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 MMP2P08253 660 aa3.81□□□□□ -1.8
VPS13B-207ENST00000518569 HSPA1AP0DMV8 641 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms