RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 TFP02787 698 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 SPARCP09486 303 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 HSPA1AP0DMV8 641 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 HSPA1BP0DMV9 641 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 ARSBP15848 533 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 GNLYP22749 145 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 BSGP35613 385 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 GNAQP50148 359 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 PMS2P54278 862 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 RPL7AP62424 266 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 GSTA3Q16772 222 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 SOWAHAQ2M3V2 549 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 DCAF12L2Q5VW00 463 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 ZKSCAN2Q63HK3 967 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 HIST2H2BCQ6DN03 193 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 HIST2H2BDQ6DRA6 164 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 TRILQ7L0X0 811 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 PARP16Q8N5Y8 322 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 TMEM163Q8TC26 289 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 INTS12Q96CB8 462 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 ZC3HAV1LQ96H79 300 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 KRCC1Q9NPI7 259 aaPredicted RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 DDX4Q9NQI0 724 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 KRT84Q9NSB2 600 aa5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 MAP3K20Q9NYL2 800 aaKnown RBP5.35□□□□□ -1.55
HMGCS1-207ENST00000514610 A0A1W2PQF6 199 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 CHL1O00533 1208 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 RGS11O94810 467 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 SYF2O95926 243 aaKnown RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 TOMM40O96008 361 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 MT-CYBP00156 380 aaPredicted RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 LCATP04180 440 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 TFPIP10646 304 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 LAMP2P13473 410 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 TBXAS1P24557 533 aaPredicted RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 SHMT1P34896 483 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 EIF5P55010 431 aaKnown RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 ZP1P60852 638 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 OLR1P78380 273 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 SETQ01105 290 aaPredicted RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 CEBPZQ03701 1054 aaKnown RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 GPR18Q14330 331 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 HIST2H2ACQ16777 129 aaPredicted RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 SLC45A4Q5BKX6 768 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 Q6ZTK2 550 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 NEK10Q6ZWH5 1172 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 ZNF367Q7RTV3 350 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 NGEFQ8N5V2 710 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 PSPC1Q8WXF1 523 aaKnown RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 SIN3AQ96ST3 1273 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 BARD1Q99728 777 aaKnown RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 H2AFJQ9BTM1 129 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 PLAC1Q9HBJ0 212 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 FAM96BQ9Y3D0 163 aa5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 LSM4Q9Y4Z0 139 aaKnown RBP5.34□□□□□ -1.55
HMGCS1-207ENST00000514610 BCAT2O15382 392 aaPredicted RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 MLYCDO95822 493 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 IRF1P10914 325 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 PCNAP12004 261 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 AGAP20933 346 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 PSMA4P25789 261 aaKnown RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 GABRB2P47870 512 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 RARSP54136 660 aaKnown RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 MYBPC2Q14324 1141 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 FGFBP1Q14512 234 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 HNF4GQ14541 408 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 COL28A1Q2UY09 1125 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 SGO1Q5FBB7 561 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 FBXO46Q6PJ61 603 aaPredicted RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 CPLX2Q6PUV4 134 aaKnown RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 CYP20A1Q6UW02 462 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 LCTLQ6UWM7 567 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 MB21D2Q8IYB1 491 aaPredicted RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 ADSSL1Q8N142 457 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 CREB3L4Q8TEY5 395 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 GTF3C6Q969F1 213 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 GFM1Q96RP9 751 aaKnown RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 STRA6Q9BX79 667 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 CLK4Q9HAZ1 481 aaKnown RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 SLC6A13Q9NSD5 602 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 PLK2Q9NYY3 685 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 ABI3Q9P2A4 366 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 LIMA1Q9UHB6 759 aaKnown RBP5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 SLCO3A1Q9UIG8 710 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 ADAM18Q9Y3Q7 739 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 KCNE2Q9Y6J6 123 aa5.33□□□□□ -1.56
HMGCS1-207ENST00000514610 LRRC53A6NM62 1247 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PRSS47A8MTI9 375 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 USP17L23D6RBM5 183 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 MS4A18H0YCH9 400 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 TNFRSF13BO14836 293 aaPredicted RBP5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 SEC14L5O43304 696 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PAGE4O60829 102 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 PTP4A3O75365 173 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 RNASEH2AO75792 299 aaKnown RBP5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 SCGB1D1O95968 90 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 CYP1A2P05177 515 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 CBSLP0DN79 551 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 ETFAP13804 333 aa5.32□□□□□ -1.56
HMGCS1-207ENST00000514610 CDAP32320 146 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms