RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 FZD4Q9ULV1 537 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 R3HDM2Q9Y2K5 976 aaKnown RBP8.43□□□□□ -1.06
CCL28-204ENST00000514421 MFHAS1Q9Y4C4 1052 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 WASF2Q9Y6W5 498 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
CCL28-204ENST00000514421 FANCMQ8IYD8 2048 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 WDR87Q6ZQQ6 2873 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 LRRC72A6NJI9 287 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 GOLGA8KD6RF30 607 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SLC7A4O43246 635 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 LIASO43766 372 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 OPA1O60313 960 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 MAFKO60675 156 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 LEFTY1O75610 366 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SEMA4FO95754 770 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 IGSF6O95976 241 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 GAS8O95995 478 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 KRT1P04264 644 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 ITGAVP06756 1048 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 NUDT17P0C025 328 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 MX2P20592 715 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TGM1P22735 817 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CCNCP24863 283 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 DRD3P35462 400 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 HSD17B3P37058 310 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 RENBPP51606 427 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 ADCY2Q08462 1091 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SPEM2Q0P670 501 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CNTN1Q12860 1018 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TFDP2Q14188 446 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 HLTFQ14527 1009 aaKnown RBP eCLIP8.42□□□□□ -1.06
CCL28-204ENST00000514421 CSRP2Q16527 193 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 HSP90B2PQ58FF3 399 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CFAP58Q5T655 872 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 ATXN7L2Q5T6C5 722 aaPredicted RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 NCBP2-AS2Q69YL0 99 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SLC9A4Q6AI14 798 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 ARHGAP36Q6ZRI8 547 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 ERN2Q76MJ5 926 aaKnown RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 BZW1Q7L1Q6 419 aaKnown RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 ARMCX6Q7L4S7 300 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CYP2U1Q7Z449 544 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 RABEPKQ7Z6M1 372 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SRLQ86TD4 932 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SLC41A1Q8IVJ1 513 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 RGL4Q8IZJ4 473 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 BBS5Q8N3I7 341 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 AADATQ8N5Z0 425 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TTC13Q8NBP0 860 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 OR2T34Q8NGX1 318 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 OR14C36Q8NHC7 312 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CEP76Q8TAP6 659 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SLC35B2Q8TB61 432 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 FBXO25Q8TCJ0 367 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CCHCR1Q8TD31 782 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 HCAR2Q8TDS4 363 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 C1orf54Q8WWF1 131 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 DNASE2BQ8WZ79 361 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 FAM131CQ96AQ9 280 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 PPP1R16AQ96I34 528 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 HSPA12BQ96MM6 686 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 ZIM3Q96PE6 472 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TSGA13Q96PP4 275 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 PSKH2Q96QS6 385 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TMEM109Q9BVC6 243 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 OSBPL1AQ9BXW6 950 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 HDAC8Q9BY41 377 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 CPEB1Q9BZB8 566 aaKnown RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 FOXP3Q9BZS1 431 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TM6SF2Q9BZW4 377 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 EPB41L4BQ9H329 900 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 KDM4CQ9H3R0 1056 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 C6orf106Q9H6K1 298 aaPredicted RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 VPS45Q9NRW7 570 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SEMA4GQ9NTN9 838 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 KLHL11Q9NVR0 708 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SERGEFQ9UGK8 458 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 SEPT3Q9UH03 358 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 EVLQ9UI08 416 aaPredicted RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 PILRBQ9UKJ0 227 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 TPX2Q9ULW0 747 aaKnown RBP8.42□□□□□ -1.06
CCL28-204ENST00000514421 SPAG17Q6Q759 2223 aa8.42□□□□□ -1.06
CCL28-204ENST00000514421 NUMA1Q14980 2115 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 CKAP5Q14008 2032 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3DA0A087WVF3 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3IA0A087WXS9 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3EA0A087X179 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3KA0A087X1G2 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3FA6NER0 549 aaPredicted RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 FAM47DPA6NHR8 397 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 C16orf96A6NNT2 1141 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3LB9A6J9 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 RNF103O00237 685 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 KHNYNO15037 678 aaKnown RBP8.41□□□□□ -1.06
CCL28-204ENST00000514421 MATN3O15232 486 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 PEX11BO96011 259 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 TBC1D3HP0C7X1 549 aa8.41□□□□□ -1.06
CCL28-204ENST00000514421 GNSP15586 552 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms