RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 IGLON5A6NGN9 336 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 KCNK3O14649 394 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 RIOK3O14730 519 aaKnown RBP9.8□□□□□ -0.84
RNF4-221ENST00000513643 SLC31A1O15431 190 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 SH3BP5O60239 455 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 FZD6O60353 706 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 SOCS5O75159 536 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 PAK4O96013 591 aaPredicted RBP9.8□□□□□ -0.84
RNF4-221ENST00000513643 PRLRP16471 622 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 PMLP29590 882 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 CDKN2BP42772 138 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 PFN3P60673 137 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 SHC2P98077 582 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 IFI16Q16666 785 aaKnown RBP9.8□□□□□ -0.84
RNF4-221ENST00000513643 UAP1L1Q3KQV9 507 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 RHOT1Q8IXI2 618 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 SLC22A18ASQ8N1D0 253 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 LRRC57Q8N9N7 239 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 DENND6BQ8NEG7 585 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 TPCN2Q8NHX9 752 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 SKA1Q96BD8 255 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 HDAC11Q96DB2 347 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 ANP32EQ9BTT0 268 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 CALN1Q9BXU9 219 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 ATP13A3Q9H7F0 1226 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 NOD2Q9HC29 1040 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 PCDH12Q9NPG4 1184 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 AASDHPPTQ9NRN7 309 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 KLHL11Q9NVR0 708 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 ITM2BQ9Y287 266 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 CA5BQ9Y2D0 317 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 DUSP10Q9Y6W6 482 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 KNTC1P50748 2209 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 PLXNA2O75051 1894 aa9.8□□□□□ -0.84
RNF4-221ENST00000513643 ZZEF1O43149 2961 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 WDFY3Q8IZQ1 3526 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 DMXL2Q8TDJ6 3036 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 POM121BA6NF01 834 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 TMEM110-MUSTN1A8MSY1 372 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 PCDH8O95206 1070 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 GIMD1P0DJR0 217 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 GM2AP17900 193 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 MX2P20592 715 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 MMP12P39900 470 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 SSR1P43307 286 aaKnown RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 MMP13P45452 471 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 PEX5P50542 639 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 SCNN1BP51168 640 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 NOVA1P51513 510 aaKnown RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 C21orf59P57076 290 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 ADCY2Q08462 1091 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 PPIDQ08752 370 aaKnown RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 RALGDSQ12967 914 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 STAT4Q14765 748 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 SPA17Q15506 151 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 SLC45A4Q5BKX6 768 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 PRAMEF14Q5SWL7 426 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 MARC1Q5VT66 337 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 PSAPL1Q6NUJ1 521 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 MFSD7Q6UXD7 560 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 KYAT3Q6YP21 454 aaKnown RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 DCP2Q8IU60 420 aaKnown RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 NAXDQ8IW45 347 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 KATNAL2Q8IYT4 538 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 ATPAF2Q8N5M1 289 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 CNTD1Q8N815 330 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 TP53I13Q8NBR0 393 aaPredicted RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 DEFB124Q8NES8 71 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 ARRDC2Q8TBH0 407 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 KLK6Q92876 244 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 TADA1Q96BN2 335 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 IFT43Q96FT9 208 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 CAMK1GQ96NX5 476 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 MCCC1Q96RQ3 725 aaPredicted RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 IL12RB2Q99665 862 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 BAG1Q99933 345 aaPredicted RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 CINPQ9BW66 212 aaPredicted RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 GOLPH3Q9H4A6 298 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 GDF3Q9NR23 364 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 TOR4AQ9NXH8 423 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 DDX56Q9NY93 547 aaKnown RBP9.79□□□□□ -0.84
RNF4-221ENST00000513643 ATP8A1Q9Y2Q0 1164 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 HYOU1Q9Y4L1 999 aa9.79□□□□□ -0.84
RNF4-221ENST00000513643 SPTY2D1-AS1A0A0U1RR47 76 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 A0A1W2PQ67 120 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 TTC24A2A3L6 582 aaPredicted RBP9.78□□□□□ -0.84
RNF4-221ENST00000513643 LRRD1A4D1F6 860 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 FAM221BA6H8Z2 402 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 TOR1BO14657 336 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 YKT6O15498 198 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 FLRT2O43155 660 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 MAGEC1O60732 1142 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 MMP20O60882 483 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 PRLP01236 227 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 ZFXP17010 805 aaPredicted RBP9.78□□□□□ -0.84
RNF4-221ENST00000513643 CES1P23141 567 aa9.78□□□□□ -0.84
RNF4-221ENST00000513643 EPHA8P29322 1005 aaPredicted RBP9.78□□□□□ -0.84
RNF4-221ENST00000513643 SERPINA4P29622 427 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms