RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 PIGVQ9NUD9 493 aa10.61□□□□□ -0.71
CLDND1-227ENST00000513452 PCDHGA3Q9Y5H0 932 aa10.61□□□□□ -0.71
CLDND1-227ENST00000513452 DOPEY1Q5JWR5 2465 aa10.61□□□□□ -0.71
CLDND1-227ENST00000513452 UNC13CQ8NB66 2214 aa10.61□□□□□ -0.71
CLDND1-227ENST00000513452 SPENQ96T58 3664 aaKnown RBP10.61□□□□□ -0.71
CLDND1-227ENST00000513452 IGHV5-10-1A0A0J9YXX1 117 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 ILVBLA1L0T0 632 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 I6L893 689 aaPredicted RBP10.6□□□□□ -0.71
CLDND1-227ENST00000513452 CAPN5O15484 640 aaPredicted RBP10.6□□□□□ -0.71
CLDND1-227ENST00000513452 THAP12O43422 761 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 MED7O43513 233 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 NUDT21O43809 227 aaKnown RBP10.6□□□□□ -0.71
CLDND1-227ENST00000513452 VPS4BO75351 444 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 DAB1O75553 588 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 GLI1P08151 1106 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 ITIH2P19823 946 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 OAS2P29728 719 aaKnown RBP10.6□□□□□ -0.71
CLDND1-227ENST00000513452 OR1D5P58170 312 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 B4GALNT1Q00973 533 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 SLC20A2Q08357 652 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 SEPT6Q14141 434 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 INPP5AQ14642 412 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 MEA1Q16626 185 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 WSCD2Q2TBF2 565 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 EFHC1Q5JVL4 640 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 SPECC1LQ69YQ0 1117 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 CAPRIN2Q6IMN6 1127 aaKnown RBP10.6□□□□□ -0.71
CLDND1-227ENST00000513452 OGFOD3Q6PK18 319 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 CCDC112Q8NEF3 446 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 KIAA1143Q96AT1 154 aaPredicted RBP10.6□□□□□ -0.71
CLDND1-227ENST00000513452 KREMEN1Q96MU8 473 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 WDR92Q96MX6 357 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 CPXM1Q96SM3 734 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 TSG101Q99816 390 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 APOOQ9BUR5 198 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 DDA1Q9BW61 102 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 DPEP2Q9H4A9 486 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 ASNSD1Q9NWL6 643 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 ARHGEF38Q9NXL2 777 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 VPS4AQ9UN37 437 aa10.6□□□□□ -0.71
CLDND1-227ENST00000513452 DRGXA6NNA5 263 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 EFCAB7A8K855 629 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 K7EM74 188 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 B4GAT1O43505 415 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 SRGAP2O75044 1071 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 SEMA7AO75326 666 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 CD160O95971 181 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 TNFP01375 233 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 PCCBP05166 539 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 TFE3P19532 575 aaPredicted RBP10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ALDH4A1P30038 563 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 SYKP43405 635 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 MAZP56270 477 aaKnown RBP10.59□□□□□ -0.71
CLDND1-227ENST00000513452 GCNT1Q02742 428 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 GNA12Q03113 381 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 POLD3Q15054 466 aaPredicted RBP10.59□□□□□ -0.71
CLDND1-227ENST00000513452 BRMS1LQ5PSV4 323 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ATXN7L2Q5T6C5 722 aaPredicted RBP10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ATP1A1-AS1Q5TC04 95 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 GDPD4Q6W3E5 623 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ZNF783Q6ZMS7 281 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 FAM183BPQ6ZVS7 135 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 HEATR4Q86WZ0 1026 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 FAM129CQ86XR2 697 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 DRC7Q8IY82 874 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 UNC5BQ8IZJ1 945 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 TEX19Q8NA77 164 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 AGBL5Q8NDL9 886 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 OR2AP1Q8NGE2 309 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ATL2Q8NHH9 583 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 LMO3Q8TAP4 145 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ZNF606Q8WXB4 792 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 OR1E3Q8WZA6 343 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 VOPP1Q96AW1 172 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ISG20Q96AZ6 181 aaKnown RBP10.59□□□□□ -0.71
CLDND1-227ENST00000513452 HAPLN3Q96S86 360 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 OSBPL1AQ9BXW6 950 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 WDCPQ9H6R7 721 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 FGF22Q9HCT0 170 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 ACP6Q9NPH0 428 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 MRPL40Q9NQ50 206 aaKnown RBP10.59□□□□□ -0.71
CLDND1-227ENST00000513452 SLC39A1Q9NY26 324 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 HPSEQ9Y251 543 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 DGKBQ9Y6T7 804 aa10.59□□□□□ -0.71
CLDND1-227ENST00000513452 LRBAP50851 2863 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 IGLV3-10A0A075B6K4 115 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 LOC101059948A0A1B0GTJ6 334 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 RHPN2P1A8MT19 583 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 GSRP00390 522 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 F13A1P00488 732 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 PRKCGP05129 697 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 CMA1P23946 247 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 COL8A1P27658 744 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 GNA15P30679 374 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 ACVRL1P37023 503 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 CXCR3P49682 368 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 SULT1E1P49888 294 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 NDUFA8P51970 172 aa10.58□□□□□ -0.72
CLDND1-227ENST00000513452 PMS1P54277 932 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms