RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 BTAF1O14981 1849 aa4.49□□□□□ -1.69
HTT-210ENST00000512909 NHSQ6T4R5 1651 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 MTA2O94776 668 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 RTN3O95197 1032 aaPredicted RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 SYF2O95926 243 aaKnown RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 IRF1P10914 325 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 ATP5F1P24539 256 aaPredicted RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 SLC16A2P36021 539 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 RHAGQ02094 409 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 TFF2Q03403 129 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 PLK5Q496M5 336 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 SH2D4BQ5SQS7 431 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 C6orf10Q5SRN2 563 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 TBC1D9BQ66K14 1250 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 HMBOX1Q6NT76 420 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 GJB7Q6PEY0 223 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 PCSK4Q6UW60 755 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 KIF6Q6ZMV9 814 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 CPXM2Q8N436 756 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 ZNF398Q8TD17 642 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 SMARCE1Q969G3 411 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 FRG2BQ96QU4 278 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 PLEKHF1Q96S99 279 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 MPHOSPH8Q99549 860 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 TMX4Q9H1E5 349 aaPredicted RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 HIPK3Q9H422 1215 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 PRKRIP1Q9H875 184 aaPredicted RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 TXNRD2Q9NNW7 524 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 ADARB2Q9NS39 739 aaKnown RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 KRT84Q9NSB2 600 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 ICKQ9UPZ9 632 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 NIP7Q9Y221 180 aaKnown RBP eCLIP4.48□□□□□ -1.69
HTT-210ENST00000512909 SLC4A4Q9Y6R1 1079 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 NUP188Q5SRE5 1749 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 KDRP35968 1356 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 USP54Q70EL1 1684 aa4.48□□□□□ -1.69
HTT-210ENST00000512909 FAM208AQ9UK61 1670 aaKnown RBP4.48□□□□□ -1.69
HTT-210ENST00000512909 SOS1Q07889 1333 aaPredicted RBP4.47□□□□□ -1.69
HTT-210ENST00000512909 USP42Q9H9J4 1324 aaKnown RBP4.47□□□□□ -1.69
HTT-210ENST00000512909 DOT1LQ8TEK3 1739 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 SBF2Q86WG5 1849 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 A0A096LPK6 155 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 GAGE10A6NGK3 116 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 PRR35P0CG20 571 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 CTSAP10619 480 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 PCNAP12004 261 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 ATP1A3P13637 1013 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 COX7A2P14406 83 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 SLC2A4P14672 509 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 GPTP24298 496 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 TUBP50607 506 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 EIF5P55010 431 aaKnown RBP4.47□□□□□ -1.69
HTT-210ENST00000512909 COL10A1Q03692 680 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 DDR1Q08345 913 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 TRIP6Q15654 476 aaKnown RBP4.47□□□□□ -1.69
HTT-210ENST00000512909 SLC18A3Q16572 532 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 VWA5B1Q5TIE3 1220 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 NCAPH2Q6IBW4 605 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 TRAPPC11Q7Z392 1133 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 UBE2Q1Q7Z7E8 422 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 TADA2BQ86TJ2 420 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 WDR5BQ86VZ2 330 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 LURAP1LQ8IV03 231 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 DDIASQ8IXT1 998 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 FAM98AQ8NCA5 519 aaKnown RBP4.47□□□□□ -1.69
HTT-210ENST00000512909 C11orf65Q8NCR3 313 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 DENND1AQ8TEH3 1009 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 RAB40AQ8WXH6 277 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 ZNF333Q96JL9 665 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 SIGLEC11Q96RL6 698 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 FUZQ9BT04 418 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.47□□□□□ -1.69
HTT-210ENST00000512909 QTRT1Q9BXR0 403 aaKnown RBP4.47□□□□□ -1.69
HTT-210ENST00000512909 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 Q9N2J8 555 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 DECR2Q9NUI1 292 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 TAS2R10Q9NYW0 307 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 PEMTQ9UBM1 199 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 PCDHGB5Q9Y5G0 923 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 HEG1Q9ULI3 1381 aa4.47□□□□□ -1.69
HTT-210ENST00000512909 ITIH6Q6UXX5 1313 aa4.46□□□□□ -1.69
HTT-210ENST00000512909 RREB1Q92766 1687 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 C17orf102A2RUQ5 167 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 FOXO6A8MYZ6 492 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 EIF3CLB5ME19 914 aaKnown RBP4.46□□□□□ -1.7
HTT-210ENST00000512909 MASP2O00187 686 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 SPTLC2O15270 562 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 SERPINC1P01008 464 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 SPARCP09486 303 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 CHMP24386 653 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 ABCD3P28288 659 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 FMO4P31512 558 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 ARL3P36405 182 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 CASP2P42575 452 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 GPR12P47775 334 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 MTNR1AP48039 350 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 RARSP54136 660 aaKnown RBP4.46□□□□□ -1.7
HTT-210ENST00000512909 PROK1P58294 105 aa4.46□□□□□ -1.7
HTT-210ENST00000512909 EFNB1P98172 346 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms