RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NSFP46459 744 aaKnown RBP12.71□□□□□ -0.37
VEGFA-216ENST00000512683 CSNK1DP48730 415 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 HK3P52790 923 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 HDAC4P56524 1084 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 UBXN1Q04323 297 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 SPIDRQ14159 915 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 LRRC14Q15048 493 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 ARHGAP40Q5TG30 622 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 INO80CQ6PI98 192 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-216ENST00000512683 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 PHLDB2Q86SQ0 1253 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 GKN2Q86XP6 184 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 PHF13Q86YI8 300 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-216ENST00000512683 UMODL1-AS1Q8N2C9 162 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 ARL10Q8N8L6 244 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 TP53I13Q8NBR0 393 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-216ENST00000512683 TMEM159Q96B96 161 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 ATXN7L3BQ96GX2 97 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 EIF3CQ99613 913 aaKnown RBP12.71□□□□□ -0.37
VEGFA-216ENST00000512683 EDEM3Q9BZQ6 932 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 CATSPERBQ9H7T0 1116 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 ADAM22Q9P0K1 906 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 DOLKQ9UPQ8 538 aa12.71□□□□□ -0.37
VEGFA-216ENST00000512683 TSPAN11A1L157 253 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 ANKRD62A6NC57 917 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 FAM72CH0Y354 149 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 J3QKU1 62 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 MUSKO15146 869 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 FGF10O15520 208 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-216ENST00000512683 TMCC1O94876 653 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 RASGRP1O95267 797 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 GJB6O95452 261 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 HOXC4P09017 264 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-216ENST00000512683 MYF5P13349 255 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 C6P13671 934 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 PNLIPP16233 465 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 TSHRP16473 764 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 XPAP23025 273 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-216ENST00000512683 EPHB2P29323 1055 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 RFC1P35251 1148 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-216ENST00000512683 IGFALSP35858 605 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 RHOAP61586 193 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 TYRO3Q06418 890 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 SERINC3Q13530 473 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 C15orf59Q2T9L4 293 aaPredicted RBP12.7□□□□□ -0.38
VEGFA-216ENST00000512683 C3orf38Q5JPI3 329 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 EFHC2Q5JST6 749 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 FAM72AQ5TYM5 149 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 FAM72DQ6L9T8 149 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 PPP1R2P3Q6NXS1 205 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 ERAP2Q6P179 960 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 VPS36Q86VN1 386 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 FAM72BQ86X60 149 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 DNAAF5Q86Y56 855 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 SLC35F3Q8IY50 421 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 AOPEPQ8N6M6 819 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 C3orf20Q8ND61 904 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 ANKRD20A12PQ8NF67 263 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 NEK11Q8NG66 645 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 OR6K2Q8NGY2 324 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 JOSD2Q8TAC2 188 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 NAF1Q96HR8 494 aaKnown RBP12.7□□□□□ -0.38
VEGFA-216ENST00000512683 TMEM74Q96NL1 305 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 TUBGCP5Q96RT8 1024 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 EPAS1Q99814 870 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 C11orf70Q9BRQ4 267 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 LRRC61Q9BV99 259 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 SELENOOQ9BVL4 669 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 B3GNT4Q9C0J1 378 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 SUV39H2Q9H5I1 410 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 ACSL6Q9UKU0 697 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 NEU3Q9UQ49 428 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 KALRNO60229 2985 aa12.7□□□□□ -0.38
VEGFA-216ENST00000512683 B8ZZF3 427 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 TNFRSF10CO14798 259 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 TNFSF15O95150 251 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CCDC172P0C7W6 258 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CTSEP14091 401 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 GPD1P21695 349 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 GKP32189 559 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 ZNF143P52747 638 aaPredicted RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 NDST2P52849 883 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 INHBCP55103 352 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 POLR2LP62875 67 aaKnown RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 NSUN2Q08J23 767 aaKnown RBP eCLIP12.69□□□□□ -0.38
VEGFA-216ENST00000512683 UGP2Q16851 508 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CDO1Q16878 200 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CLEC16AQ2KHT3 1053 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 KLHL40Q2TBA0 621 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 PERM1Q5SV97 790 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 WDR59Q6PJI9 974 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 OGFOD3Q6PK18 319 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 CCDC81Q6ZN84 652 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 TTC9Q92623 222 aa12.69□□□□□ -0.38
VEGFA-216ENST00000512683 HMCESQ96FZ2 354 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms