RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 HOXB1P14653 301 aaPredicted RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 CD1CP29017 333 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 GKP32189 559 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 VAMP7P51809 220 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 MAZP56270 477 aaKnown RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 AMPD3Q01432 767 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 ARHGEF7Q14155 803 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 IRF4Q15306 451 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 KLHL40Q2TBA0 621 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 EDRF1Q3B7T1 1238 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 C14orf28Q4W4Y0 310 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 LRRC73Q5JTD7 316 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 UNC13DQ70J99 1090 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 SLC34A3Q8N130 599 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 BMPERQ8N8U9 685 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 SLC35F5Q8WV83 523 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 KIAA1143Q96AT1 154 aaPredicted RBP9.24□□□□□ -0.93
NUP54-211ENST00000512151 RTP4Q96DX8 246 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 RNF31Q96EP0 1072 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 PDXPQ96GD0 296 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 PPP1R16AQ96I34 528 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 BTN2A3PQ96KV6 586 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 HAPLN3Q96S86 360 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 RBM15Q96T37 977 aaKnown RBP eCLIP9.24□□□□□ -0.933e-11■■■■■ 43.2
NUP54-211ENST00000512151 CTRCQ99895 268 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 MIS12Q9H081 205 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 LUZP4Q9P127 313 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 HESX1Q9UBX0 185 aa9.24□□□□□ -0.93
NUP54-211ENST00000512151 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 C16orf96A6NNT2 1141 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 KCNU1A8MYU2 1149 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 IGLV3-25P01717 112 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 NR3C1P04150 777 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 SETSIPP0DME0 302 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 CD19P15391 556 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ITIH2P19823 946 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 MAP4P27816 1152 aaKnown RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 CSF2RBP32927 897 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 BLKP51451 505 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 LIMK2P53671 638 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 SRP54P61011 504 aaKnown RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 MC1RQ01726 317 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 EIF4EBP2Q13542 120 aaPredicted RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 NKAIN2Q5VXU1 208 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 CEP135Q66GS9 1140 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ISM2Q6H9L7 571 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 CAVIN1Q6NZI2 390 aaKnown RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 FOXR2Q6PJQ5 311 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ENPP7Q6UWV6 458 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 RBM43Q6ZSC3 357 aaKnown RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 MCEMP1Q8IX19 187 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 TP53INP2Q8IXH6 220 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 NRSN1Q8IZ57 195 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 Q8NA96 180 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 AGBL5Q8NDL9 886 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 FAM46DQ8NEK8 389 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 CCL4L1Q8NHW4 92 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 TMEM174Q8WUU8 243 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 CCDC114Q96M63 670 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 RPRD1AQ96P16 312 aaPredicted RBP9.23□□□□□ -0.93
NUP54-211ENST00000512151 TRIM55Q9BYV6 548 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 LRRC27Q9C0I9 530 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 DNAI2Q9GZS0 605 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 NUP62CLQ9H1M0 184 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 KCTD10Q9H3F6 313 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.23□□□□□ -0.93
NUP54-211ENST00000512151 MAN1B1Q9UKM7 699 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ITGB1BP2Q9UKP3 347 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ENTPD4Q9Y227 616 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 TBC1D30Q9Y2I9 924 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ACTL7AQ9Y615 435 aa9.23□□□□□ -0.93
NUP54-211ENST00000512151 ANKHD1Q8IWZ3 2542 aaKnown RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 POLEQ07864 2286 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 A0A0D9SEW6 157 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 PVALEFA0A1B0GWK0 134 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 B4E171 279 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 AREL1O15033 823 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 NUDT21O43809 227 aaKnown RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 MYL1P05976 194 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 BMP6P22004 513 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 ALDH4A1P30038 563 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 TSPAN7P41732 249 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 CCNHP51946 323 aaPredicted RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 PMS2P54278 862 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 ABHD18Q0P651 414 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 STK4Q13043 487 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 AUHQ13825 339 aaKnown RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 ERV3-1Q14264 604 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 NAA30Q147X3 362 aaPredicted RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 RABGAP1LQ5R372 815 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 DCAF12Q5T6F0 453 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 TTC39BQ5VTQ0 682 aaPredicted RBP9.22□□□□□ -0.93
NUP54-211ENST00000512151 SPECC1LQ69YQ0 1117 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 LCLAT1Q6UWP7 414 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 ZNF438Q7Z4V0 828 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 TAF8Q7Z7C8 310 aa9.22□□□□□ -0.93
NUP54-211ENST00000512151 ZSCAN30Q86W11 494 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms