RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 POLGP54098 1239 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 PRKAA2P54646 552 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 TLE3Q04726 772 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 TAF5Q15542 800 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 GALNTL6Q49A17 601 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CCDC152Q4G0S7 254 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 WDR93Q6P2C0 686 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 RINLQ6ZS11 566 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 RFX8Q6ZV50 586 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 RRAGAQ7L523 313 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 RPAINQ86UA6 219 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 MOGAT3Q86VF5 341 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF354CQ86Y25 554 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 HERC6Q8IVU3 1022 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 SMAP1Q8IYB5 467 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 UBALD2Q8IYN6 164 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CPXCR1Q8N123 301 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 THAP4Q8WY91 577 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 CPT1BQ92523 772 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 C3orf49Q96BT1 292 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 SDCCAG3Q96C92 435 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 MRPL38Q96DV4 380 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 P2RY11Q96G91 374 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF845Q96IR2 970 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 TGS1Q96RS0 853 aaKnown RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 GATA5Q9BWX5 397 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 NUAK2Q9H093 628 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 HIPK3Q9H422 1215 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 ELOVL5Q9NYP7 299 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 NDUFAF4Q9P032 175 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 KIF17Q9P2E2 1029 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 MTUS1Q9ULD2 1270 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC12A4Q9UP95 1085 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 LZTS1Q9Y250 596 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 B3GNT3Q9Y2A9 372 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 HEMK1Q9Y5R4 338 aaPredicted RBP3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 R4GN57 208 aa3.92□□□□□ -1.78
TOPBP1-208ENST00000511439 RFX7Q2KHR2 1363 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 FRYQ5TBA9 3013 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP3A7-CYP3A51PA0A087WV96 503 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 MBD3L5A6NJ08 208 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 C3orf70A6NLC5 250 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 B9A039 149 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 IRAK2O43187 625 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 KAT7O95251 611 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC3A2P08195 630 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP21A2P08686 494 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 HOXC6P09630 235 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 PEPDP12955 493 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 PLA2G2AP14555 144 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CYP3A7P24462 503 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 GRK5P34947 590 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 IDUAP35475 653 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 FOXG1P55316 489 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 TAS2R50P59544 299 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 IRX3P78415 501 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 BIRC3Q13489 604 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CUL4BQ13620 913 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 FHL1Q13642 323 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 KPNB1Q14974 876 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 RPS6KA2Q15349 733 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SEC23BQ15437 767 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SMAD1Q15797 465 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 PFKFB3Q16875 520 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 RALGAPA2Q2PPJ7 1873 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 TBRG1Q3YBR2 411 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 OTOGLQ3ZCN5 2332 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 TCEAL5Q5H9L2 206 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CC2D1BQ5T0F9 858 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 DGAT2L7PQ6IED9 249 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SLC2A7Q6PXP3 512 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF517Q6ZMY9 492 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 ZNF813Q6ZN06 617 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 TFAP2DQ7Z6R9 452 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SRFBP1Q8NEF9 429 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 PRSS3P2Q8NHM4 247 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SPPL3Q8TCT6 385 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 PIGOQ8TEQ8 1089 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 C5orf34Q96MH7 638 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SENP7Q9BQF6 1050 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 SH2D3AQ9BRG2 576 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 WACQ9BTA9 647 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 EFHD1Q9BUP0 239 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 TWSG1Q9GZX9 223 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 ABHD16BQ9H3Z7 469 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CD209Q9NNX6 404 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 G6PC2Q9NQR9 355 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 ASNSD1Q9NWL6 643 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CD207Q9UJ71 328 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 MAFFQ9ULX9 164 aa3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 CNOT1A5YKK6 2376 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-208ENST00000511439 LOC285556D6RIA3 1793 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3DA0A087WVF3 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3IA0A087WXS9 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3EA0A087X179 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3KA0A087X1G2 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 SMIM35A0A1B0GVV1 85 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3BA6NDS4 549 aa3.9□□□□□ -1.79
TOPBP1-208ENST00000511439 TBC1D3FA6NER0 549 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms