RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 GNG11P61952 73 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 WASHC5Q12768 1159 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 UGP2Q16851 508 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 ARMC12Q5T9G4 340 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 PEAR1Q5VY43 1037 aaPredicted RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 ITPRIPL1Q6GPH6 555 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 B4GALNT4Q76KP1 1039 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TTC7BQ86TV6 843 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 SYT12Q8IV01 421 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 RGL4Q8IZJ4 473 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 DEFB119Q8N690 84 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 CNTD1Q8N815 330 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 PDCD6IPQ8WUM4 868 aaKnown RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 BIRC7Q96CA5 298 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TRIM44Q96DX7 344 aaPredicted RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TEKT5Q96M29 485 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 NAP1L3Q99457 506 aaPredicted RBP12.97□□□□□ -0.33
COL6A6-203ENST00000511332 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 TRHDEQ9UKU6 1024 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 FADS3Q9Y5Q0 445 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 DMDP11532 3685 aa12.97□□□□□ -0.33
COL6A6-203ENST00000511332 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 TCRBV7S2A1N4TA0A589 114 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 TTC24A2A3L6 582 aaPredicted RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 CES2O00748 559 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 KCNN4O15554 427 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 LATO43561 262 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 GFRA3O60609 400 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PCDH8O95206 1070 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PGLSO95336 258 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 IGHV4-34P06331 123 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 GNSP15586 552 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 ITPKAP23677 461 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 RBL1P28749 1068 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 CXCR5P32302 372 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 MMP12P39900 470 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 CD86P42081 329 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PPP2CBP62714 309 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 RPS21P63220 83 aaKnown RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PPP2CAP67775 309 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 TRAF2Q12933 501 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 SETMARQ53H47 684 aaPredicted RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 HS1BP3Q53T59 392 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 ASCL5Q7RTU5 278 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 NDUFAF2Q8N183 169 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 ZNF567Q8N184 647 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 SLC35B2Q8TB61 432 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 ARRDC2Q8TBH0 407 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 DNASE2BQ8WZ79 361 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PIGKQ92643 395 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 IMP4Q96G21 291 aaKnown RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PPP1R2P1Q96PQ5 205 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 OSBPL9Q96SU4 736 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 TDRD1Q9BXT4 1180 aaKnown RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 ARRDC1-AS1Q9H2J1 176 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 GLOD4Q9HC38 313 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 RSPH14Q9UHP6 348 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PILRBQ9UKJ0 227 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 R3HDM2Q9Y2K5 976 aaKnown RBP12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PCDHB9Q9Y5E1 797 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PCDHGC4Q9Y5F7 938 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 RAI2Q9Y5P3 530 aa12.96□□□□□ -0.33
COL6A6-203ENST00000511332 PCDH15Q96QU1 1955 aa12.96□□□□□ -0.34
COL6A6-203ENST00000511332 SCN8AQ9UQD0 1980 aa12.96□□□□□ -0.34
COL6A6-203ENST00000511332 ADAMTS9Q9P2N4 1935 aa12.96□□□□□ -0.34
COL6A6-203ENST00000511332 TMEM131Q92545 1883 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 OTOGLQ3ZCN5 2332 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 A0A1W2PPC4 97 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 A0A1W2PQU0 124 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 PRR5-ARHGAP8B1AHC4 643 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 C10orf142B7Z368 130 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 PGRMC1O00264 195 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 AREL1O15033 823 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 LIASO43766 372 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 FOXD2O60548 495 aaPredicted RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 OPHN1O60890 802 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 RNGTTO60942 597 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 TIMP2P16035 220 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 NFKB1P19838 968 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 CD27P26842 260 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 TNNT3P45378 269 aaPredicted RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 RPL26P61254 145 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 NIPAL4Q0D2K0 466 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 LRRC73Q5JTD7 316 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 USP45Q70EL2 814 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 PID1Q7Z2X4 250 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 ADAT2Q7Z6V5 191 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 PRPF39Q86UA1 669 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 HORMAD1Q86X24 394 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 ZSWIM9Q86XI8 627 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 RASGEF1CQ8N431 466 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 GPR161Q8N6U8 529 aaKnown RBP12.95□□□□□ -0.34
COL6A6-203ENST00000511332 CEP76Q8TAP6 659 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 CXorf40AQ8TE69 158 aa12.95□□□□□ -0.34
COL6A6-203ENST00000511332 ATG4AQ8WYN0 398 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms