RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 C15orf59Q2T9L4 293 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 USP41Q3LFD5 358 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 PLEKHO1Q53GL0 409 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 BMP2KLQ5H9B9 411 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 C6orf141Q5SZD1 244 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 MEX3CQ5U5Q3 659 aaKnown RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 PRAMEF17Q5VTA0 474 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 PLEKHA7Q6IQ23 1121 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 KDELC2Q7Z4H8 507 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 SERPINA11Q86U17 422 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 CCDC25Q86WR0 208 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 DNAAF5Q86Y56 855 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 LINC00346Q8IVM7 164 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 TEX11Q8IYF3 940 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 FAM185AQ8N0U4 392 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 SYT2Q8N9I0 419 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 IGFBPL1Q8WX77 278 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 BBS4Q96RK4 519 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 C1QTNF1Q9BXJ1 281 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 KLK15Q9H2R5 256 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 ERVMER34-1Q9H9K5 563 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 SPAG4Q9NPE6 437 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 CCDC177Q9NQR7 707 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 IL17RBQ9NRM6 502 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 SEMA4GQ9NTN9 838 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 SEL1LQ9UBV2 794 aa5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 CNOT8Q9UFF9 292 aaKnown RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 EXO1Q9UQ84 846 aaKnown RBP5.65□□□□□ -1.5
HMGB1P47-201ENST00000511281 HSPB2A8KAH6 182 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 KLRF2D3W0D1 207 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 NPIPB8E9PQR5 432 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 CTDSP2O14595 271 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 FOXN1O15353 648 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 HS6ST1O60243 411 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 TBX10O75333 385 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 PROP1O75360 226 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 DAB1O75553 588 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 SRPRAP08240 638 aaKnown RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 ITGAXP20702 1163 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 PON1P27169 355 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 SHMT1P34896 483 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 CAMPP49913 170 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 ZBED6P86452 979 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 TFAP4Q01664 338 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 PMPCAQ10713 525 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 GRIK3Q13003 919 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 HSPB2Q16082 182 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 TCTN1Q2MV58 587 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 ALG10Q5BKT4 473 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 ALG10BQ5I7T1 473 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 ZNF362Q5T0B9 420 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 HECTD3Q5T447 861 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 ERMARDQ5T6L9 678 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 KRT79Q5XKE5 535 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 SEPT14Q6ZU15 432 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 DENND5BQ6ZUT9 1274 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 AMIGO2Q86SJ2 522 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 TSPAN33Q86UF1 283 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 DDIASQ8IXT1 998 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 SLC25A41Q8N5S1 370 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 PNLDC1Q8NA58 520 aaKnown RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 POMGNT2Q8NAT1 580 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 LRRC59Q96AG4 307 aaKnown RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 RNF183Q96D59 192 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 SAT2Q96F10 170 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 EFHD1Q9BUP0 239 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 C1QTNF5Q9BXJ0 243 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 RANGRFQ9HD47 186 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 LTB4R2Q9NPC1 389 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 PAPOLBQ9NRJ5 636 aaKnown RBP5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 TLK1Q9UKI8 766 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 PADI1Q9ULC6 663 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 NENFQ9UMX5 172 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 LAMP3Q9UQV4 416 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 CCL27Q9Y4X3 112 aa5.64□□□□□ -1.51
HMGB1P47-201ENST00000511281 LOC100509620A0A075B734 347 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 KIR2DS5A0A0G2JLQ3 304 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 KIR2DS3K7RE56 304 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 SNAP23O00161 211 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 MITFO75030 526 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 GCP02774 474 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 MYZAPP0CAP1 466 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 ACTN1P12814 892 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 KRT10P13645 584 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 ZNF182P17025 639 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 PROZP22891 400 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 EEF1DP29692 281 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 LMAN1P49257 510 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 PPP5CP53041 499 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 MFAP4P55083 255 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 RRP1P56182 461 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 MRPS5P82675 430 aaKnown RBP5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 TFF2Q03403 129 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 KLF10Q13118 480 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 COL28A1Q2UY09 1125 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 ADALQ6DHV7 355 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 CRIP3Q6Q6R5 217 aa5.63□□□□□ -1.51
HMGB1P47-201ENST00000511281 VSIG1Q86XK7 387 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms