RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NLRC4Q9NPP4 1024 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 SIRPGQ9P1W8 387 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 DKK3Q9UBP4 350 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 SIK3Q9Y2K2 1263 aa16.09■□□□□ 0.17
RAB40C-202ENST00000509637 ANKRD36A6QL64 1941 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 RASA4BC9J798 803 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 J3KR12 359 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 J3QKU1 62 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 RASA4O43374 803 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 ANXA6P08133 673 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 SDC4P31431 198 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 THOP1P52888 689 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 POLR2FP61218 127 aaKnown RBP16.08■□□□□ 0.16
RAB40C-202ENST00000509637 YPEL5P62699 121 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 LINC00303Q3SY05 128 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 BROXQ5VW32 411 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 HID1Q8IV36 788 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 RTL3Q8N8U3 475 aaKnown RBP16.08■□□□□ 0.16
RAB40C-202ENST00000509637 PCDH19Q8TAB3 1148 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 BTN2A2Q8WVV5 523 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 NTAN1Q96AB6 310 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 CCDC74AQ96AQ1 378 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 TBATAQ96M53 351 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 FOXP3Q9BZS1 431 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 VPS16Q9H269 839 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 PDFQ9HBH1 243 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 GULP1Q9UBP9 304 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 OR1A2Q9Y585 309 aa16.08■□□□□ 0.16
RAB40C-202ENST00000509637 ARHGEF17Q96PE2 2063 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-202ENST00000509637 TSPAN11A1L157 253 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 AGRPO00253 132 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 CCP110O43303 1012 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 TCEA3O75764 348 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 WT1P19544 449 aaPredicted RBP16.07■□□□□ 0.16
RAB40C-202ENST00000509637 RBMS1P29558 406 aaKnown RBP16.07■□□□□ 0.16
RAB40C-202ENST00000509637 SOX5P35711 763 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 HK3P52790 923 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 RPL7AP62424 266 aaKnown RBP16.07■□□□□ 0.16
RAB40C-202ENST00000509637 PPARDQ03181 441 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 SERINC3Q13530 473 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 INPP5AQ14642 412 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 ARL13BQ3SXY8 428 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 ZSCAN30Q86W11 494 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 SDR16C5Q8N3Y7 309 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 TPCN2Q8NHX9 752 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 WDR36Q8NI36 951 aaKnown RBP16.07■□□□□ 0.16
RAB40C-202ENST00000509637 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 APOOQ9BUR5 198 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 OSBPL1AQ9BXW6 950 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 PCDH12Q9NPG4 1184 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 TMEM51Q9NW97 253 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 GPATCH2LQ9NWQ4 482 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 FZD10Q9ULW2 581 aa16.07■□□□□ 0.16
RAB40C-202ENST00000509637 CCDC187A0A096LP49 1063 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 WASH4PA8MWX3 477 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 B8ZZF3 427 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 PES1O00541 588 aaKnown RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 KRT3P12035 628 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 C6P13671 934 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 SLC5A2P31639 672 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 UGT1A5P35504 534 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 ETFBP38117 255 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 ETV5P41161 510 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 UCNP55089 124 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 GSCP56915 257 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 RALGDSQ12967 914 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 PTK2BQ14289 1009 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 KRT31Q15323 416 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 CA9Q16790 459 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 INO80DQ53TQ3 878 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 PPP1R15BQ5SWA1 713 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 CDKAL1Q5VV42 579 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 ENPP7Q6UWV6 458 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 MON1BQ7L1V2 547 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 RD3Q7Z3Z2 195 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 ZNF677Q86XU0 584 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 CAMK1DQ8IU85 385 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 TP53INP2Q8IXH6 220 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 ARFGAP1Q8N6T3 406 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 CCL4L1Q8NHW4 92 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 CXorf40AQ8TE69 158 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 OR1E3Q8WZA6 343 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 PDXPQ96GD0 296 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 CPEB1Q9BZB8 566 aaKnown RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 EDEM3Q9BZQ6 932 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 SLC13A1Q9BZW2 595 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 RETREG1Q9H6L5 497 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 LRRC19Q9H756 370 aa16.06■□□□□ 0.16
RAB40C-202ENST00000509637 MRPL40Q9NQ50 206 aaKnown RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 FAM207AQ9NSI2 230 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 ATXN7L1Q9ULK2 861 aaPredicted RBP16.06■□□□□ 0.16
RAB40C-202ENST00000509637 PIEZO2Q9H5I5 2752 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 TMEM202A6NGA9 273 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 SIGLEC16A6NMB1 481 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 RIOK3O14730 519 aaKnown RBP16.05■□□□□ 0.16
RAB40C-202ENST00000509637 FUCA1P04066 466 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 GPD1P21695 349 aa16.05■□□□□ 0.16
RAB40C-202ENST00000509637 EPHB2P29323 1055 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms