RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 RABIFP47224 123 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ARRB1P49407 418 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PRRX1P54821 245 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ACTR3P61158 418 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SKP1P63208 163 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SLC6A3Q01959 620 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MALLQ13021 153 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF792Q3KQV3 632 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 AFMIDQ63HM1 303 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 KIAA1841Q6NSI8 718 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 HHIPL2Q6UWX4 724 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 WDR88Q6ZMY6 472 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SLC46A3Q7Z3Q1 461 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 GPAT4Q86UL3 456 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 TBC1D10CQ8IV04 446 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 GLB1L3Q8NCI6 653 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 S100PBPQ96BU1 408 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RNF31Q96EP0 1072 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 WRNIP1Q96S55 665 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZDHHC5Q9C0B5 715 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RPF1Q9H9Y2 349 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 LIN7CQ9NUP9 197 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF214Q9UL59 606 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ENTPD4Q9Y227 616 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PCDHA10Q9Y5I2 948 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 POTECB2RU33 542 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 C3orf80F5H4A9 247 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 IGF2BP3O00425 579 aaKnown RBP eCLIP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ATXN7O15265 892 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ARHGAP6O43182 974 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 TBX1O43435 398 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FMO6PO60774 539 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PSIP1O75475 530 aaKnown RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 UNC5CO95185 931 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PRAMEF12O95522 483 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ANP32DO95626 131 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 APBA3O96018 575 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZBTB48P10074 688 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FMO4P31512 558 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CSF2RBP32927 897 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SOX6P35712 828 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 RWDD2BP57060 319 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ANTXR2P58335 489 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 FMO1Q01740 532 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 HSF2Q03933 536 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF827Q17R98 1081 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF568Q3ZCX4 644 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ZNF667Q5HYK9 610 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PTCRAQ6ISU1 281 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 LCORLQ8N3X6 602 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CCDC197Q8NCU1 140 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 IGDCC4Q8TDY8 1250 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 COPS5Q92905 334 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 SPSB4Q96A44 273 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PHF21BQ96EK2 531 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 EEF2KMTQ96G04 330 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 CDKN2AIPNLQ96HQ2 116 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PAFAH2Q99487 392 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 COQ10BQ9H8M1 238 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MORF4L1Q9UBU8 362 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 MAGEL2Q9UJ55 1249 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 ATXN7L1Q9ULK2 861 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PADI2Q9Y2J8 665 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 TIMM13Q9Y5L4 95 aaPredicted RBP3.96□□□□□ -1.78
NEDD4-209ENST00000508871 PIAS3Q9Y6X2 628 aa3.96□□□□□ -1.78
NEDD4-209ENST00000508871 WDR90Q96KV7 1748 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 GPR75-ASB3A0A0A6YYF3 556 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 A0A0B4J293 547 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 A0A1W2PRG0 241 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 C12orf71A8MTZ7 269 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 H7C1Q1 480 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 SYT5O00445 386 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 PSMD10O75832 226 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 TUSC2O75896 110 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 DXOO77932 396 aaKnown RBP3.95□□□□□ -1.78
NEDD4-209ENST00000508871 TMCC1O94876 653 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 OR6A2O95222 327 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 LARGE1O95461 756 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 HOXD13P35453 343 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 NOVP48745 357 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 NPY4RP50391 375 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 PLCD1P51178 756 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 ALDH3A2P51648 485 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 SEC24CP53992 1094 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 NR1H2P55055 460 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 VAMP2P63027 116 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 SH3BP2P78314 561 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 RPP38P78345 283 aaKnown RBP3.95□□□□□ -1.78
NEDD4-209ENST00000508871 TGM3Q08188 693 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 DDR1Q08345 913 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 ACSM2AQ08AH3 577 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 HSPA14Q0VDF9 509 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 DMC1Q14565 340 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 KCNAB1Q14722 419 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 SHROOM1Q2M3G4 852 aaPredicted RBP3.95□□□□□ -1.78
NEDD4-209ENST00000508871 TBRG1Q3YBR2 411 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 KBTBD12Q3ZCT8 623 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 FLYWCH1Q4VC44 716 aa3.95□□□□□ -1.78
NEDD4-209ENST00000508871 PABPC1LQ4VXU2 614 aaKnown RBP3.95□□□□□ -1.78
NEDD4-209ENST00000508871 CMPK2Q5EBM0 449 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms