RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 HM13Q8TCT9 377 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 TFAP2CQ92754 450 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 NTAN1Q96AB6 310 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 PBXIP1Q96AQ6 731 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 ISOC1Q96CN7 298 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 PHF21BQ96EK2 531 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 DUS3LQ96G46 650 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 MED10Q9BTT4 135 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 MRPL40Q9NQ50 206 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 UBQLN1Q9UMX0 589 aaKnown RBP13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 CDC14AQ9UNH5 594 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 SLC8A2Q9UPR5 921 aa13.53□□□□□ -0.24
SNCAIP-209ENST00000508017 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 A8MT66 165 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 NRP2O60462 931 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 NME5P56597 212 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 DNAJB13P59910 316 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 TUBA4AP68366 448 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 SCAPQ12770 1279 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 PRPSAP1Q14558 356 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 MAPRE2Q15555 327 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 GRIK4Q16099 956 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 UGP2Q16851 508 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 ANKDD1AQ495B1 522 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 TECRLQ5HYJ1 363 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 BTBD8Q5XKL5 378 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 PPP4R4Q6NUP7 873 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 C8orf82Q6P1X6 216 aaPredicted RBP13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 DHRS4L2Q6PKH6 230 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 CYHR1Q6ZMK1 362 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 DHFR2Q86XF0 187 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 BBS5Q8N3I7 341 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 CBR4Q8N4T8 237 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 LZTR1Q8N653 840 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 ANKFN1Q8N957 763 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 EDEM1Q92611 657 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 C12orf43Q96C57 262 aaKnown RBP13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 OTUD5Q96G74 571 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 TNIP3Q96KP6 325 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 PLEKHG4BQ96PX9 1271 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 TBL1YQ9BQ87 522 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 FICDQ9BVA6 458 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 ATXN3LQ9H3M9 355 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 IL1RL2Q9HB29 575 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 RAD54BQ9Y620 910 aa13.52□□□□□ -0.24
SNCAIP-209ENST00000508017 OTOFQ9HC10 1997 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 H3BRB1 525 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 UBFD1O14562 309 aaKnown RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 MTSS1O43312 755 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 TPST1O60507 370 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 HUS1O60921 280 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 GPC4O75487 556 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 SEC24DO94855 1032 aaPredicted RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 LRIG2O94898 1065 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC25A27O95847 323 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 NCAM1P13591 858 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 CHRNA4P43681 627 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 SAMD4BQ5PRF9 694 aaKnown RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 ACBD5Q5T8D3 534 aaPredicted RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 IL31Q6EBC2 164 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 DENND5AQ6IQ26 1287 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 ARMCX2Q7L311 632 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 GPR141Q7Z602 305 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 RETREG3Q86VR2 466 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 EPHX4Q8IUS5 362 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 FUNDC1Q8IVP5 155 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 MIPOL1Q8TD10 442 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 SLC9A7Q96T83 725 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 OSMRQ99650 979 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 OLFM1Q99784 485 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 OSBPL6Q9BZF3 934 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 TUT1Q9H6E5 874 aaKnown RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 TMEM30AQ9NV96 361 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 CACNG4Q9UBN1 327 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 AURKCQ9UQB9 309 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 MTF2Q9Y483 593 aaPredicted RBP13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 DNAH12Q6ZR08 3092 aa13.52□□□□□ -0.25
SNCAIP-209ENST00000508017 ZNF236Q9UL36 1845 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 NRCAMQ92823 1304 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 C9JVG2 144 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 CLIC3O95833 236 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 TFPTP0C1Z6 253 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 USP17L7P0C7H9 530 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 CD151P48509 253 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 TAF6P49848 677 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 DAOAP59103 153 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 TAPT1Q6NXT6 567 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 ERMP1Q7Z2K6 904 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 GPR180Q86V85 440 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 OR2T3Q8NH03 318 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 KCTD13Q8WZ19 329 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 TCF12Q99081 682 aa13.51□□□□□ -0.25
SNCAIP-209ENST00000508017 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms