RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 HOXA11P31270 313 aaPredicted RBP3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 TUBA1BP68363 451 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 TRAF3Q13114 568 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 MYBPC2Q14324 1141 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 ZRSR2Q15696 482 aaKnown RBP3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 BAK1Q16611 211 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 FBXO43Q4G163 708 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 SPSB3Q6PJ21 355 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 CREB3L2Q70SY1 520 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 GDPD5Q8WTR4 605 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 TRIB2Q92519 343 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 RTP4Q96DX8 246 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 SCLT1Q96NL6 688 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 YME1L1Q96TA2 773 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 IL25Q9H293 177 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 DDX31Q9H8H2 851 aaKnown RBP3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 PPCSQ9HAB8 311 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 TMEM51Q9NW97 253 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 CNOT7Q9UIV1 285 aaKnown RBP3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 ERRFI1Q9UJM3 462 aaPredicted RBP3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 SLC13A4Q9UKG4 626 aa3.19□□□□□ -1.9
AC008539.1-201ENST00000507653 DYTNA2CJ06 578 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 EIF3FO00303 357 aaPredicted RBP3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 CEP104O60308 925 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 HEXAP06865 529 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 ITGAXP20702 1163 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 GABRB2P47870 512 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 COMPP49747 757 aaPredicted RBP3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 TMPRSS3P57727 454 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 BNC1Q01954 994 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 FOXD4Q12950 439 aaPredicted RBP3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 CAMK1Q14012 370 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 NAA25Q14CX7 972 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 PLCB4Q15147 1175 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 KIF19Q2TAC6 998 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 PRICKLE4Q2TBC4 344 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 EDRF1Q3B7T1 1238 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 SERTAD4-AS1Q5TG53 156 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 FAM69BQ5VUD6 431 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 C9orf57Q5W0N0 161 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 FAM122CQ6P4D5 195 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 C16orf82Q7Z2V1 217 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 ADGRG6Q86SQ4 1221 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 MON1AQ86VX9 555 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 RASSF8Q8NHQ8 419 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 MAGEC3Q8TD91 643 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 MORC4Q8TE76 937 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 ELP4Q96EB1 424 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 LHPPQ9H008 270 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 INTS2Q9H0H0 1204 aaKnown RBP3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 MROH8Q9H579 483 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF556Q9HAH1 456 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 SMYD2Q9NRG4 433 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 LUZP4Q9P127 313 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 KIAA1456Q9P272 454 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 PDP2Q9P2J9 529 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 TBX20Q9UMR3 447 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 CARD8Q9Y2G2 431 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 PAM16Q9Y3D7 125 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 NFE2L3Q9Y4A8 694 aa3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 TCF20Q9UGU0 1960 aaKnown RBP3.18□□□□□ -1.9
AC008539.1-201ENST00000507653 IGLV5-37A0A075B6J1 123 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 PABPN1LA6NDY0 278 aaKnown RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 SRRM3A6NNA2 597 aaPredicted RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 KDM4EB2RXH2 506 aaPredicted RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 KLRF2D3W0D1 207 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 NCAM2O15394 837 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 IFIT1P09914 478 aaKnown RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 DDX5P17844 614 aaKnown RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 C21orf33P30042 268 aaPredicted RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 PGM1P36871 562 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 CXCR3P49682 368 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 ILF3Q12906 894 aaKnown RBP eCLIP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 TXNDC8Q6A555 127 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 PLEKHA7Q6IQ23 1121 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 TBC1D26Q86UD7 250 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 FAM160B2Q86V87 743 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 CHD1LQ86WJ1 897 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 MB21D2Q8IYB1 491 aaPredicted RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 GPT2Q8TD30 523 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 ZNF385AQ96PM9 386 aaKnown RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 FIZ1Q96SL8 496 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 EYA3Q99504 573 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 GPR63Q9BZJ6 419 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 WASH6PQ9NQA3 447 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 LRRFIP2Q9Y608 721 aaKnown RBP3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 A3GALT2U3KPV4 340 aa3.17□□□□□ -1.9
AC008539.1-201ENST00000507653 A0A1W2PQM1 296 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 KLK8O60259 260 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 KRT36O76013 467 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 MTA2O94776 668 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 CH25HO95992 272 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 SLC2A4P14672 509 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 AGAP20933 346 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 PEX5P50542 639 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 HILS1P60008 231 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 EFNB1P98172 346 aa3.16□□□□□ -1.9
AC008539.1-201ENST00000507653 TRPC3Q13507 836 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms