RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ZNF599Q96NL3 588 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 SNRNP25Q9BV90 132 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 CINPQ9BW66 212 aaPredicted RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 TAS2R14Q9NYV8 317 aa14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 APOBEC3BQ9UH17 382 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-203ENST00000507004 TDRD6O60522 2096 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 A0A1W2PQJ5 194 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 H3BRJ5 948 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 SPINT1O43278 529 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 OPA1O60313 960 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 MMP20O60882 483 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ERCC2P18074 760 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PTMSP20962 102 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 MIPP30301 263 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ARL4AP40617 200 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ABCG1P45844 678 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PAPOLAP51003 745 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 AP1S1P61966 158 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PPARDQ03181 441 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PIGHQ14442 188 aaPredicted RBP14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 NR1I3Q14994 352 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 CDCP2Q5VXM1 449 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 AFMIDQ63HM1 303 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 CAVIN1Q6NZI2 390 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 LVRNQ6Q4G3 990 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ZNF571Q7Z3V5 609 aaPredicted RBP14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PDZD3Q86UT5 571 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PHACTR4Q8IZ21 702 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PAF1Q8N7H5 531 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 LMX1AQ8TE12 382 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 FGF11Q92914 225 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 VOPP1Q96AW1 172 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 SLC39A8Q9C0K1 460 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 KLC2Q9H0B6 622 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ISCUQ9H1K1 167 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 SEPT3Q9UH03 358 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 PCSK1NQ9UHG2 260 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ITM2BQ9Y287 266 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ATP8A1Q9Y2Q0 1164 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 ADAMTS20P59510 1910 aa14.56□□□□□ -0.08
HMGCS1-203ENST00000507004 AKAP13Q12802 2813 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 EME2A4GXA9 379 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 LMO7DNF2Z398 122 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 DDX3XO00571 662 aaKnown RBP eCLIP14.55□□□□□ -0.081e-15■■□□□ 13.2
HMGCS1-203ENST00000507004 LRCH4O75427 683 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 TCEA3O75764 348 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 RASGRP1O95267 797 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 ANXA6P08133 673 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 ALPIP09923 528 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 KELP23276 732 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 SERPINB6P35237 376 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 IGFALSP35858 605 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 EIF4A3P38919 411 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 BCL2L1Q07817 233 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 EIF2B5Q13144 721 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 MTM1Q13496 603 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 ELOCQ15369 112 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 NR0B2Q15466 257 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 KLHL40Q2TBA0 621 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 COL28A1Q2UY09 1125 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 ZNF542PQ5EBM4 170 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 PPP6R3Q5H9R7 873 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 RALGPS1Q5JS13 557 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 FAXCQ5TGI0 409 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 ESRP1Q6NXG1 681 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 SRLQ86TD4 932 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 LRRC49Q8IUZ0 686 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 TP53I13Q8NBR0 393 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 OR6C4Q8NGE1 309 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 MAPK15Q8TD08 544 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 NSMCE1Q8WV22 266 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 SPOCK2Q92563 424 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 ZNF578Q96N58 590 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 PSKH2Q96QS6 385 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 HAUS2Q9NVX0 235 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 GGT7Q9UJ14 662 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 DOLKQ9UPQ8 538 aa14.55□□□□□ -0.08
HMGCS1-203ENST00000507004 GOLGA6L19H0YKK7 550 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 J3KR12 359 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 PDE2AO00408 941 aaPredicted RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 EIF2S3P41091 472 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 SEMG2Q02383 582 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 IQCB1Q15051 598 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 DPYSL2Q16555 572 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 TDRD12Q587J7 1177 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 PRRT3Q5FWE3 981 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 C6orf132Q5T0Z8 1188 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 C19orf48Q6RUI8 117 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 MARCH9Q86YJ5 346 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 IFI44Q8TCB0 444 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 HNRNPLLQ8WVV9 542 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 TEKT4Q8WW24 435 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 ECHDC3Q96DC8 303 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 CELF6Q96J87 481 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 EXOC2Q96KP1 924 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 KCTD15Q96SI1 283 aaPredicted RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 WRAP53Q9BUR4 548 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 BOCQ9BWV1 1114 aa14.54□□□□□ -0.08
HMGCS1-203ENST00000507004 PCDH12Q9NPG4 1184 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms