RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GRID2IPA4D2P6 1211 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 MIF4GDA9UHW6 222 aaKnown RBP16.84■□□□□ 0.29
SNCA-209ENST00000506244 CDX4O14627 284 aaPredicted RBP16.84■□□□□ 0.29
SNCA-209ENST00000506244 AREL1O15033 823 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 DFNA5O60443 496 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 CCDC175P0C221 793 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 CCNB1P14635 433 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 CR2P20023 1033 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 CA4P22748 312 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 MARCKSL1P49006 195 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 RWDD2BP57060 319 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 SGCGQ13326 291 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 UGP2Q16851 508 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 ZNF284Q2VY69 593 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 SEL1L3Q68CR1 1132 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 ALG1LQ6GMV1 187 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 PEX26Q7Z412 305 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 LRRC8AQ8IWT6 810 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 UBL4BQ8N7F7 174 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 MFSD2AQ8NA29 543 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 DENND6BQ8NEG7 585 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 UBE2Q2Q8WVN8 375 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 SPOCK2Q92563 424 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 ECHDC3Q96DC8 303 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 EBF2Q9HAK2 575 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 FSCN3Q9NQT6 498 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 AMFRQ9UKV5 643 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 ATP8A1Q9Y2Q0 1164 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 PCDHA3Q9Y5H8 950 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 ADGRG1Q9Y653 693 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 SLCO1B1Q9Y6L6 691 aa16.84■□□□□ 0.29
SNCA-209ENST00000506244 hCG_1818297A0A087WSY0 165 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 CST8O60676 142 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 ZNF883P0CG24 379 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 PRLRP16471 622 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 IFI35P80217 286 aaPredicted RBP16.83■□□□□ 0.28
SNCA-209ENST00000506244 ITKQ08881 620 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 AP1B1Q10567 949 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 SLC10A2Q12908 348 aaPredicted RBP16.83■□□□□ 0.28
SNCA-209ENST00000506244 SLC14A1Q13336 389 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 UAP1L1Q3KQV9 507 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 KAZNQ674X7 775 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 PGBD5Q8N414 524 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 OXR1Q8N573 874 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 ASB12Q8WXK4 309 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 KRT35Q92764 455 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 SLC17A9Q9BYT1 436 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 GDF3Q9NR23 364 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 RBM22Q9NW64 420 aaKnown RBP eCLIP16.83■□□□□ 0.28
SNCA-209ENST00000506244 ZFR2Q9UPR6 939 aaKnown RBP16.83■□□□□ 0.28
SNCA-209ENST00000506244 ITM2BQ9Y287 266 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 EFR3BQ9Y2G0 817 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 TTLL3Q9Y4R7 772 aa16.83■□□□□ 0.28
SNCA-209ENST00000506244 ANKRD36A6QL64 1941 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 DMXL1Q9Y485 3027 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 TRAFD1O14545 582 aaPredicted RBP16.82■□□□□ 0.28
SNCA-209ENST00000506244 SLC31A1O15431 190 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 YKT6O15498 198 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 SPINT1O43278 529 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 MTSS1O43312 755 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 CPP00450 1065 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 KRT10P13645 584 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 TIMP2P16035 220 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 PTPN7P35236 360 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 MMP12P39900 470 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 CTSKP43235 329 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 MAXP61244 160 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 KIF19Q2TAC6 998 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 LRRC73Q5JTD7 316 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 LAYNQ6UX15 382 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 DGLUCYQ7Z3D6 616 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 NT5DC3Q86UY8 548 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 TMEM145Q8NBT3 493 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 P3H4Q92791 437 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 LGMNQ99538 433 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 GAREM1Q9H706 876 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 NOD2Q9HC29 1040 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 PCDH12Q9NPG4 1184 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 TRPM6Q9BX84 2022 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 ADAMTS9Q9P2N4 1935 aa16.82■□□□□ 0.28
SNCA-209ENST00000506244 SPTBN4Q9H254 2564 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 A0A1W2PR77 199 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 A6NNZ2 444 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 TLR4O00206 839 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 RIOK3O14730 519 aaKnown RBP16.81■□□□□ 0.28
SNCA-209ENST00000506244 HTRA2O43464 458 aaPredicted RBP16.81■□□□□ 0.28
SNCA-209ENST00000506244 TM7SF2O76062 418 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 CCT8P50990 548 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 HLA-BQ31612 363 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 TMEM52BQ4KMG9 183 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 CCDC181Q5TID7 509 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 BBS12Q6ZW61 710 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 NDUFAF2Q8N183 169 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 PDCD6IPQ8WUM4 868 aaKnown RBP16.81■□□□□ 0.28
SNCA-209ENST00000506244 TFB1MQ8WVM0 346 aaKnown RBP16.81■□□□□ 0.28
SNCA-209ENST00000506244 KLK6Q92876 244 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 LENG8Q96PV6 779 aaPredicted RBP16.81■□□□□ 0.28
SNCA-209ENST00000506244 ALS2CR12Q96Q35 445 aa16.81■□□□□ 0.28
SNCA-209ENST00000506244 SEMA3CQ99985 751 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms