RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 RILPQ96NA2 401 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 SORT1Q99523 831 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 BTBD10Q9BSF8 475 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 C11orf49Q9H6J7 331 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 POPDC3Q9HBV1 291 aa17.4■□□□□ 0.38
TRAPPC11-204ENST00000505676 CXorf51AA0A1B0GTR3 108 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 INSIG1O15503 277 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 LDB2O43679 373 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 RPP40O75818 363 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 RBP1P09455 135 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 DNAJB13P59910 316 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 WDR5P61964 334 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 IRF9Q00978 393 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 DLG2Q15700 870 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 METTL21CQ5VZV1 264 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 FAM45BPQ6NSW5 357 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 CFAP52Q8N1V2 620 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 FAM45AQ8TCE6 357 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 USP13Q92995 863 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 MYEOVQ96EZ4 313 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 NUDCD1Q96RS6 583 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 TRIB3Q96RU7 358 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 C20orf27Q9GZN8 174 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 DRC3Q9H069 523 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 RUVBL2Q9Y230 463 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 CBX6O95503 412 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 KLKB1P03952 638 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 MBL2P11226 248 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 CR2P20023 1033 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 SMAD1Q15797 465 aaKnown RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 INO80DQ53TQ3 878 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 KIF2BQ8N4N8 673 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 SCYL1Q96KG9 808 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 NMUR2Q9GZQ4 415 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 ILKAPQ9H0C8 392 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 FBXO6Q9NRD1 293 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 VTI1BQ9UEU0 232 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 VPS9D1Q9Y2B5 631 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 RAP2CQ9Y3L5 183 aa17.39■□□□□ 0.37
TRAPPC11-204ENST00000505676 A0A0D9SEW6 157 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 CCDC78A2IDD5 438 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 CAPN14A8MX76 684 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 ITM2AO43736 263 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 GJA8P48165 433 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 RPS24P62847 133 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 PRKAA1Q13131 559 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 WASHC2DQ5SRD0 308 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 KDELC2Q7Z4H8 507 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 SDCCAG8Q86SQ7 713 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 METTL3Q86U44 580 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 FAM217AQ8IXS0 508 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 CENPLQ8N0S6 344 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 GPATCH11Q8N954 259 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 OR7D4Q8NG98 312 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 SPON2Q9BUD6 331 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 TBC1D10AQ9BXI6 508 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 CDH19Q9H159 772 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 NOD2Q9HC29 1040 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 MRGBPQ9NV56 204 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZNF358Q9NW07 568 aa17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 LSM7Q9UK45 103 aaKnown RBP17.38■□□□□ 0.37
TRAPPC11-204ENST00000505676 TARM1B6A8C7 271 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 PFDN6O15212 129 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 PHGDHO43175 533 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 NPHS1O60500 1241 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 GLP2RO95838 553 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 F11P03951 625 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 AOC1P19801 751 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 TAS2R39P59534 338 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 RCN2Q14257 317 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 CFAP157Q5JU67 520 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 CCDC149Q6ZUS6 474 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 FSTL5Q8N475 847 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 ZNF784Q8NCA9 323 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 OMDQ99983 421 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 ADGRE3Q9BY15 652 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 SCUBE2Q9NQ36 999 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 INTS10Q9NVR2 710 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 HACD3Q9P035 362 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 TAGLN3Q9UI15 199 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 PENKP01210 267 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 LTA4HP09960 611 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 KITP10721 976 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 CCND1P24385 295 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 TAF1AQ15573 450 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 FSCBQ5H9T9 825 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 PIWIL4Q7Z3Z4 852 aaKnown RBP17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 TNS4Q8IZW8 715 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 TMEM151AQ8N4L1 468 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 OR6P1Q8NGX9 317 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 KCTD4Q8WVF5 259 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 HDAC10Q969S8 669 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 ARMC5Q96C12 935 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 GPR78Q96P69 363 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 YME1L1Q96TA2 773 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 TCF12Q99081 682 aa17.37■□□□□ 0.37
TRAPPC11-204ENST00000505676 C19orf43Q9BQ61 176 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms