RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 PIGNO95427 931 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 NDST3O95803 873 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 FGF1P05230 155 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 CTSLP07711 333 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 GOLGA6DP0CG33 693 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 HLA-DPA1P20036 260 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 CES1P23141 567 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 SP100P23497 879 aaPredicted RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 EIF2DP41214 584 aaKnown RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 SOX9P48436 509 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 ARCN1P48444 511 aaKnown RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 EIF3BP55884 814 aaKnown RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 FAM193AP78312 1265 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 ACVR1Q04771 509 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 SULT2A1Q06520 285 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 ITKQ08881 620 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 STAT4Q14765 748 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 RASA2Q15283 850 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 DLG2Q15700 870 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 CCDC85BQ15834 202 aaPredicted RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 CDKN3Q16667 212 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 QPCTQ16769 361 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 AAK1Q2M2I8 961 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 ANKRD20A4Q4UJ75 823 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 IER5LQ5T953 404 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 ARMC3Q5W041 872 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 GRAMD4Q6IC98 578 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 C3orf62Q6ZUJ4 267 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 Q6ZVU0 165 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 MTSS1LQ765P7 747 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 KDELC2Q7Z4H8 507 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 PLPP6Q8IY26 295 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 CYP4X1Q8N118 509 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 BBS5Q8N3I7 341 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 TTC30BQ8N4P2 665 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 SLC25A41Q8N5S1 370 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 PCDH20Q8N6Y1 951 aaKnown RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 CHST14Q8NCH0 376 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 OR13J1Q8NGT2 312 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 OR2A12Q8NGT7 310 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 TTC8Q8TAM2 541 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 GSDMBQ8TAX9 411 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 DCAKDQ8WVC6 231 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 PIH1D2Q8WWB5 315 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 MFSD3Q96ES6 412 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 MTG2Q9H4K7 406 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 VPS37BQ9H9H4 285 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 UGT1A7Q9HAW7 530 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 UGT1A10Q9HAW8 530 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 UGT1A8Q9HAW9 530 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 SCUBE2Q9NQ36 999 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 CHRAC1Q9NRG0 131 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 THG1LQ9NWX6 298 aaKnown RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 GOLGA6AQ9NYA3 693 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 IL1RAPL1Q9NZN1 696 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 BFARQ9NZS9 450 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 FETUBQ9UGM5 382 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 SLC2A6Q9UGQ3 507 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 EVLQ9UI08 416 aaPredicted RBP10.48□□□□□ -0.73
TPM3-217ENST00000504663 GGT7Q9UJ14 662 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 CHKBQ9Y259 395 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 PCDHGC4Q9Y5F7 938 aa10.48□□□□□ -0.73
TPM3-217ENST00000504663 PLXNA2O75051 1894 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 TSPAN11A1L157 253 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 HMX2A2RU54 273 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 FOXO6A8MYZ6 492 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 AURKAO14965 403 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 SOCS5O75159 536 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 NEBLO76041 1014 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PGLSO95336 258 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 ASLP04424 464 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 SRPRAP08240 638 aaKnown RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 DLDP09622 509 aaKnown RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 CCNHP51946 323 aaPredicted RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 ENPP2Q13822 863 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 POU6F1Q14863 301 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 SMAD2Q15796 467 aaKnown RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 KBTBD12Q3ZCT8 623 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PCID2Q5JVF3 399 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 SPANXN3Q5MJ09 141 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 AGBL2Q5U5Z8 902 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PKN3Q6P5Z2 889 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 TXNDC11Q6PKC3 985 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 DPY19L3Q6ZPD9 716 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 MARK2Q7KZI7 788 aaKnown RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 PTCD2Q8WV60 388 aaKnown RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 SLC44A1Q8WWI5 657 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PTPRN2Q92932 1015 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 ZNF669Q96BR6 464 aaPredicted RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 EID2BQ96D98 161 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PGM2Q96G03 612 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 PAFAH2Q99487 392 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 TRMT61BQ9BVS5 477 aaKnown RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 FSD1LQ9BXM9 530 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 TMEM245Q9H330 911 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
TPM3-217ENST00000504663 ELOVL2Q9NXB9 296 aa10.47□□□□□ -0.73
TPM3-217ENST00000504663 SLC25A13Q9UJS0 675 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 345.1 ms