RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MGRN1O60291 552 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 KLHL41O60662 606 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 RAMP2O60895 175 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 SKAP2O75563 359 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 T-ENOLP0DO92 83 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 FGF3P11487 239 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 CCL5P13501 91 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 TACR2P21452 398 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 TARSP26639 723 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 OR1D2P34982 312 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ALDH7A1P49419 539 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 KCNQ1P51787 676 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 HTRA3P83110 453 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 SLC10A7Q0GE19 358 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 PCLAFQ15004 111 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ESRP1Q6NXG1 681 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 CLNKQ7Z7G1 428 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 SDCCAG8Q86SQ7 713 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 METTL3Q86U44 580 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 CIR1Q86X95 450 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 CRLF3Q8IUI8 442 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ARID3BQ8IVW6 561 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 TEX26Q8N6G2 289 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 KCT2Q8NC54 265 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 PSMG2Q969U7 264 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ATP6V1E2Q96A05 226 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 PABPC5Q96DU9 382 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 CEP295NLQ96MC4 621 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 VN1R3Q9BXE9 311 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 RNF208Q9H0X6 261 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CWH43Q9H720 699 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CAB39LQ9H9S4 337 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 THAP1Q9NVV9 213 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ZNF358Q9NW07 568 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 KCNK4Q9NYG8 393 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 FBXO10Q9UK96 956 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 A0A096LPK6 155 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 TOR1BO14657 336 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CSPG5O95196 566 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 HADHAP40939 763 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CHRNA4P43681 627 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 MAPKAPK2P49137 400 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 TUFMP49411 452 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 CENPAP49450 140 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 MNAT1P51948 309 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 FOXK1P85037 733 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CDK18Q07002 472 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 TNK2Q07912 1038 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 IL10RBQ08334 325 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ITKQ08881 620 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 POLD3Q15054 466 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 PCSK7Q16549 785 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 PARP15Q460N3 678 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CCDC153Q494R4 210 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 SLC39A5Q6ZMH5 540 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 KDELC2Q7Z4H8 507 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CLEC14AQ86T13 490 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ZNF354CQ86Y25 554 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CNTN4Q8IWV2 1026 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 RNF168Q8IYW5 571 aaPredicted RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 PLD6Q8N2A8 252 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 ACVR1CQ8NER5 493 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 NSMCE1Q8WV22 266 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 MYEOVQ96EZ4 313 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 CDK5RAP1Q96SZ6 601 aaKnown RBP11.68□□□□□ -0.54
USP46-204ENST00000503060 GPR22Q99680 433 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 C20orf27Q9GZN8 174 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 LRMDAQ9H2I8 198 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ATXN3LQ9H3M9 355 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 RHOJQ9H4E5 214 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 C12orf49Q9H741 205 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 ATP13A1Q9HD20 1204 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 HAO1Q9UJM8 370 aa11.68□□□□□ -0.54
USP46-204ENST00000503060 C2orf71A6NGG8 1288 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 VAPBO95292 243 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SLC4A1P02730 911 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 C2P06681 752 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 KRT16P08779 473 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SERPINB3P29508 390 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 CD86P42081 329 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 ARCN1P48444 511 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 YBEYP58557 167 aaPredicted RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 MAXP61244 160 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 AP2B1P63010 937 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 TLE2Q04725 743 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 ZBTB16Q05516 673 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 GRM3Q14832 879 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 DLG2Q15700 870 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 CTC1Q2NKJ3 1217 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SH2D4BQ5SQS7 431 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 ZC3HC1Q86WB0 502 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 C10orf107Q8IVU9 208 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 SLC25A41Q8N5S1 370 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 TRMT2BQ96GJ1 504 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 RBM18Q96H35 190 aaKnown RBP11.67□□□□□ -0.54
USP46-204ENST00000503060 IGSF21Q96ID5 467 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 VPS45Q9NRW7 570 aa11.67□□□□□ -0.54
USP46-204ENST00000503060 TREX1Q9NSU2 369 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms