RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 CD86P42081 329 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 PGFP49763 221 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 MRPS35P82673 323 aaKnown RBP12.08□□□□□ -0.48
NUP54-202ENST00000502850 BTKQ06187 659 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 USP4Q13107 963 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 KLF10Q13118 480 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 PSMD5Q16401 504 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 ARL13AQ5H913 290 aaPredicted RBP12.08□□□□□ -0.48
NUP54-202ENST00000502850 C10orf120Q5SQS8 335 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 TFAP2DQ7Z6R9 452 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 SLC22A9Q8IVM8 553 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
NUP54-202ENST00000502850 CPSF7Q8N684 471 aaKnown RBP12.08□□□□□ -0.48
NUP54-202ENST00000502850 PDZD8Q8NEN9 1154 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 TADA1Q96BN2 335 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 FEM1CQ96JP0 617 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 CXorf56Q9H5V9 222 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 NMRK1Q9NWW6 199 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 NUDT5Q9UKK9 219 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 LRFN2Q9ULH4 789 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 RIMKLBQ9ULI2 386 aa12.08□□□□□ -0.48
NUP54-202ENST00000502850 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.08□□□□□ -0.48
NUP54-202ENST00000502850 A0A088AWK7 358 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 SLC12A8A0AV02 714 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 CCDC78A2IDD5 438 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 MTMR11A4FU01 709 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 F5H5T6 163 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 DCXO43602 365 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 TBX10O75333 385 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 PENKP01210 267 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 ALDH2P05091 517 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 LTA4HP09960 611 aaKnown RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 HAPLN1P10915 354 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 MPSTP25325 297 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 AVPR1AP37288 418 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 MNX1P50219 401 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 NAGLUP54802 743 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 SESN3P58005 492 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 TAS2R39P59534 338 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 PRAMEP78395 509 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 GALNT1Q10472 559 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 MSLNQ13421 630 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 CUL3Q13618 768 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 ZNF235Q14590 738 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 MBTPS1Q14703 1052 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 LBRQ14739 615 aaKnown RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 MGAT5BQ3V5L5 792 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 SLC9B1Q4ZJI4 515 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 VWA5B1Q5TIE3 1220 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 RAP1GAP2Q684P5 730 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 FAM45BPQ6NSW5 357 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 FBXL22Q6P050 247 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 ANKS3Q6ZW76 656 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 TMEM151AQ8N4L1 468 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 SLC25A41Q8N5S1 370 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 ACVR1CQ8NER5 493 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 RP9Q8TA86 221 aaKnown RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 FAM45AQ8TCE6 357 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 OVCA2Q8WZ82 227 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 IFT43Q96FT9 208 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 RPRD1AQ96P16 312 aaPredicted RBP12.07□□□□□ -0.48
NUP54-202ENST00000502850 GPR78Q96P69 363 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 PANX3Q96QZ0 392 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 TRMOQ9BU70 441 aa12.07□□□□□ -0.48
NUP54-202ENST00000502850 LOC285095A0A1B0GVY8 99 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 RGSL1A5PLK6 1076 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 MROH6A6NGR9 719 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 MEI4A8MW99 385 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 E9PBE3 544 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 ARVCFO00192 962 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 DLX3O60479 287 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 KLHL41O60662 606 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 PRAMEF11O60813 436 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SBK3P0C264 359 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 ZDHHC11BP0C7U3 371 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 ANPEPP15144 967 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 TFEBP19484 476 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 CHRNA4P43681 627 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 GLRBP48167 497 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 GPR15P49685 360 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 USP46P62068 366 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 ACVR1Q04771 509 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SLC10A7Q0GE19 358 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 TAF10Q12962 218 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SERINC3Q13530 473 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 ACAP2Q15057 778 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 TECRLQ5HYJ1 363 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 SDHAF4Q5VUM1 108 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 LHX8Q68G74 356 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 MRNIPQ6NTE8 343 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 IRGCQ6NXR0 463 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 FUT10Q6P4F1 479 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 MIB1Q86YT6 1006 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 CILP2Q8IUL8 1156 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 CEP97Q8IW35 865 aa12.06□□□□□ -0.48
NUP54-202ENST00000502850 FBXO27Q8NI29 283 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms