RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CEP192Q8TEP8 1941 aa25.33■■□□□ 1.65
LSM6-202ENST00000502781 A0A1W2PQ67 120 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 UPK3BL1B0FP48 263 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 UPK3BL2E5RIL1 263 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 H7C0C1 242 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 ENC1O14682 589 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 TSPAN6O43657 245 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 FZD6O60353 706 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 FSBPO95073 299 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 MMP2P08253 660 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 MAOBP27338 520 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 RBL1P28749 1068 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 ATP5OP48047 213 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 FAM182AQ5T1J6 154 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 AGAP3Q96P47 875 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 FAM118BQ9BPY3 351 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 EIF2B4Q9UI10 523 aaKnown RBP25.32■■□□□ 1.64
LSM6-202ENST00000502781 TTLL3Q9Y4R7 772 aa25.32■■□□□ 1.64
LSM6-202ENST00000502781 A0A1W2PPC4 97 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 CD27P26842 260 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 TMEM259Q4ZIN3 620 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 HORMAD1Q86X24 394 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 CDKL3Q8IVW4 592 aaPredicted RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 TADA1Q96BN2 335 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 IMP4Q96G21 291 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 SLC25A51Q9H1U9 297 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 C10orf88Q9H8K7 445 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 USP29Q9HBJ7 922 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 GGT7Q9UJ14 662 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 ZFR2Q9UPR6 939 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 ITM2BQ9Y287 266 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 RNGTTO60942 597 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 PGLSO95336 258 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 SERPINF2P08697 491 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 ZNF806P0C7X5 589 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 MSNP26038 577 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 CD68P34810 354 aaPredicted RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 NUDT1P36639 197 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 SKOR1P84550 965 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 SPEM2Q0P670 501 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 LRRC73Q5JTD7 316 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 CFAP58Q5T655 872 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 KIAA1161Q6NSJ0 714 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 PRPF39Q86UA1 669 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 ZSCAN30Q86W11 494 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 RGL4Q8IZJ4 473 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 ZNF567Q8N184 647 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 TDRD1Q9BXT4 1180 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 GLOD4Q9HC38 313 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 PARD6AQ9NPB6 346 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 VPS45Q9NRW7 570 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 RAI2Q9Y5P3 530 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 SLCO1B1Q9Y6L6 691 aa25.31■■□□□ 1.64
LSM6-202ENST00000502781 ATXN2Q99700 1313 aaKnown RBP25.31■■□□□ 1.64
LSM6-202ENST00000502781 A0A1W2PQU0 124 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 RIOK3O14730 519 aaKnown RBP25.3■■□□□ 1.64
LSM6-202ENST00000502781 ZNF189O75820 626 aaPredicted RBP25.3■■□□□ 1.64
LSM6-202ENST00000502781 PCDH8O95206 1070 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 ITIH2P19823 946 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 POLR2LP62875 67 aaKnown RBP25.3■■□□□ 1.64
LSM6-202ENST00000502781 ELP6Q0PNE2 266 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 SIX1Q15475 284 aaPredicted RBP25.3■■□□□ 1.64
LSM6-202ENST00000502781 SLC14A2Q15849 920 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 CSRP2Q16527 193 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 ZNF284Q2VY69 593 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 RABEPKQ7Z6M1 372 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 FEM1CQ96JP0 617 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 FRMD8P1Q9BZ68 369 aaPredicted RBP25.3■■□□□ 1.64
LSM6-202ENST00000502781 PCDH12Q9NPG4 1184 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 SEMA4GQ9NTN9 838 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 SUSD2Q9UGT4 822 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 TRHDEQ9UKU6 1024 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 PPIL1Q9Y3C6 166 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 PCDHB9Q9Y5E1 797 aa25.3■■□□□ 1.64
LSM6-202ENST00000502781 PRLP01236 227 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 ATP1A1P05023 1023 aaKnown RBP25.29■■□□□ 1.64
LSM6-202ENST00000502781 CXCR5P32302 372 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 CD86P42081 329 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 TMEM52BQ4KMG9 183 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 ARMC12Q5T9G4 340 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 DARS2Q6PI48 645 aaKnown RBP25.29■■□□□ 1.64
LSM6-202ENST00000502781 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.29■■□□□ 1.64
LSM6-202ENST00000502781 PIH1D2Q8WWB5 315 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 SNX19Q92543 992 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 PHTF1Q9UMS5 762 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 DMTF1Q9Y222 760 aa25.29■■□□□ 1.64
LSM6-202ENST00000502781 PDHA1P08559 390 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 XPAP23025 273 aaPredicted RBP25.28■■□□□ 1.64
LSM6-202ENST00000502781 MMP12P39900 470 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 RPS21P63220 83 aaKnown RBP25.28■■□□□ 1.64
LSM6-202ENST00000502781 CCDC6Q16204 474 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 DUOXA1Q1HG43 343 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 SEL1L3Q68CR1 1132 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 SLC23A3Q6PIS1 610 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 ALYREFQ86V81 257 aaKnown RBP25.28■■□□□ 1.64
LSM6-202ENST00000502781 RASGEF1CQ8N431 466 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 CEP76Q8TAP6 659 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 FERMT1Q9BQL6 677 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 C1QTNF2Q9BXJ5 285 aa25.28■■□□□ 1.64
LSM6-202ENST00000502781 KLHL8Q9P2G9 620 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms