RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TMCC3Q9ULS5 477 aa17.33■□□□□ 0.36
HMGXB3-201ENST00000502717 LOC100506127A0A0U1RQW1 187 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 INO80DQ53TQ3 878 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 REP15Q6BDI9 236 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 TRMT10BQ6PF06 316 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 QKIQ96PU8 341 aaKnown RBP eCLIP17.32■□□□□ 0.363e-38■■■■■ 83.5
HMGXB3-201ENST00000502717 ACO2Q99798 780 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 GLIS2Q9BZE0 524 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 IGKV6D-41A0A0C4DH26 115 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 SLC15A5A6NIM6 579 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 HOXB6P17509 224 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 CAPGP40121 348 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 SERPINH1P50454 418 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 TATDN1Q6P1N9 297 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ARHGAP36Q6ZRI8 547 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 PAGE2Q7Z2X7 111 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 UNC5BQ8IZJ1 945 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ROPN1LQ96C74 230 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ASB9Q96DX5 294 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 CINPQ9BW66 212 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ATXN3LQ9H3M9 355 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 HIPK3Q9H422 1215 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 MOV10Q9HCE1 1003 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 SEMA4BQ9NPR2 832 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ADAM30Q9UKF2 790 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 NFASCO94856 1347 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 SAGE2PA6NJ88 616 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 IFNA14P01570 189 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 KRT6AP02538 564 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 KRT6BP04259 564 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 XRCC1P18887 633 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 KRT6CP48668 564 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 ZNF829Q3KNS6 432 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 FRMD7Q6ZUT3 714 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 PACRGLQ8N7B6 248 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 FAM45AQ8TCE6 357 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 HMBSP08397 361 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 DBTP11182 482 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 TWF1Q12792 350 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 TREML1Q86YW5 311 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 TBCDQ9BTW9 1192 aa17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 H2AFY2Q9P0M6 372 aaPredicted RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 COPG1Q9Y678 874 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-201ENST00000502717 GBE1Q04446 702 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 DENND5AQ6IQ26 1287 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TTC23LQ6PF05 361 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 FAM156AQ8NDB6 213 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 PHF21AQ96BD5 680 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TLE6Q9H808 572 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 REEP1Q9H902 201 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 RCOR3Q9P2K3 495 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 RAPGEFL1Q9UHV5 662 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TNFSF13BQ9Y275 285 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 RBMX2Q9Y388 322 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 FAM189A1O60320 539 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 POU1F1P28069 291 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 FSTL1Q12841 308 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 CTBP1Q13363 440 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 CAPSQ13938 189 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TAB1Q15750 504 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 DNAJC14Q6Y2X3 702 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 MARVELD2Q8N4S9 558 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 AKT1S1Q96B36 256 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 PTBP2Q9UKA9 531 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 PADI4Q9UM07 663 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 IPPQ9Y573 584 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TCRBV7S3A2A0A539 114 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 G3V2T6 193 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 ITM2AO43736 263 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A9O60656 530 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 CAPN1P07384 714 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 NFICP08651 508 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A6P19224 532 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A1P22309 533 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A4P22310 534 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A3P35503 534 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A5P35504 534 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 SPDYE7PQ495Y7 208 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 ARHGAP15Q53QZ3 475 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 ARMCX6Q7L4S7 300 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 MYDGFQ969H8 173 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 YTHDF1Q9BYJ9 559 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 BCAS3Q9H6U6 928 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A7Q9HAW7 530 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A10Q9HAW8 530 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 UGT1A8Q9HAW9 530 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 IGSF9Q9P2J2 1179 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 ARHGAP28Q9P2N2 729 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 SLC26A3P40879 764 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 LHX1P48742 406 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 SLC9B1Q4ZJI4 515 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TOP1MTQ969P6 601 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 BORCS6Q96GS4 357 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 TEKT5Q96M29 485 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 CSPG4P5Q96PW8 444 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 PHF12Q96QT6 1004 aa17.31■□□□□ 0.36
HMGXB3-201ENST00000502717 DGKBQ9Y6T7 804 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms