RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 FADS3Q9Y5Q0 445 aa14.3□□□□□ -0.12
RNF4-202ENST00000502316 ZNF292O60281 2723 aa14.3□□□□□ -0.12
RNF4-202ENST00000502316 TNRC6BQ9UPQ9 1833 aaKnown RBP14.29□□□□□ -0.12
RNF4-202ENST00000502316 C5orf60A6NFR6 353 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 METTL12A8MUP2 240 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 UPK3BL1B0FP48 263 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 UPK3BL2E5RIL1 263 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 LATO43561 262 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 OPHN1O60890 802 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 STK10O94804 968 aaKnown RBP14.29□□□□□ -0.12
RNF4-202ENST00000502316 PGLSO95336 258 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 ITGAVP06756 1048 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 NFKB1P19838 968 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 STIP1P31948 543 aaKnown RBP14.29□□□□□ -0.12
RNF4-202ENST00000502316 CD86P42081 329 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 PTGER3P43115 390 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 CCR5P51681 352 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 POLR2LP62875 67 aaKnown RBP14.29□□□□□ -0.12
RNF4-202ENST00000502316 CFAP58Q5T655 872 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 LAIR1Q6GTX8 287 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 TRIM69Q86WT6 500 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 C1orf54Q8WWF1 131 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 MS4A14Q96JA4 679 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 SPATA13Q96N96 652 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 FCRL5Q96RD9 977 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 TMEM121Q9BTD3 319 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 GBA3Q9H227 469 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 KLHL8Q9P2G9 620 aaPredicted RBP14.29□□□□□ -0.12
RNF4-202ENST00000502316 RAB23Q9ULC3 237 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.29□□□□□ -0.12
RNF4-202ENST00000502316 PCDHB9Q9Y5E1 797 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 RAI2Q9Y5P3 530 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 THADAQ6YHU6 1953 aa14.29□□□□□ -0.12
RNF4-202ENST00000502316 ZNF185O15231 689 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 TSPAN6O43657 245 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 GCATO75600 419 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 LMNAP02545 664 aaKnown RBP14.28□□□□□ -0.12
RNF4-202ENST00000502316 IGHV4-34P06331 123 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 CA4P22748 312 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 GDF10P55107 478 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 RPL26P61254 145 aaKnown RBP14.28□□□□□ -0.12
RNF4-202ENST00000502316 ANKRD20A2Q5SQ80 823 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 ARMC12Q5T9G4 340 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 ANKRD20A1Q5TYW2 823 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 ANKRD20A3Q5VUR7 823 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 KIAA0895LQ68EN5 471 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 ITPRIPL1Q6GPH6 555 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 PID1Q7Z2X4 250 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 TTC7BQ86TV6 843 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 ZSCAN30Q86W11 494 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF4-202ENST00000502316 FAM71DQ8N9W8 422 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 CEP192Q8TEP8 1941 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 DNASE2BQ8WZ79 361 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 BIRC7Q96CA5 298 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 HSPA12BQ96MM6 686 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 RBM15Q96T37 977 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF4-202ENST00000502316 VPS45Q9NRW7 570 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 RPL26L1Q9UNX3 145 aaKnown RBP14.28□□□□□ -0.12
RNF4-202ENST00000502316 DRG1Q9Y295 367 aaKnown RBP14.28□□□□□ -0.12
RNF4-202ENST00000502316 PPIL1Q9Y3C6 166 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 SAR1BQ9Y6B6 198 aa14.28□□□□□ -0.12
RNF4-202ENST00000502316 SDK1Q7Z5N4 2213 aa14.27□□□□□ -0.12
RNF4-202ENST00000502316 TBC1D3DA0A087WVF3 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3IA0A087WXS9 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3EA0A087X179 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3KA0A087X1G2 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3FA6NER0 549 aaPredicted RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3LB9A6J9 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 EPN2O95208 641 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 MT-CYBP00156 380 aaPredicted RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 CPP00450 1065 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 PRLP01236 227 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 PDHA1P08559 390 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3HP0C7X1 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 MMP12P39900 470 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 DHPSP49366 369 aaPredicted RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 PPP2CBP62714 309 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 PPP2CAP67775 309 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 ELP6Q0PNE2 266 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 LPAL2Q16609 132 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 CYP1B1Q16678 543 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TMEM259Q4ZIN3 620 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 LRRC73Q5JTD7 316 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 PEAR1Q5VY43 1037 aaPredicted RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 LYSMD4Q5XG99 296 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3GQ6DHY5 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3CQ6IPX1 549 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 KIAA1161Q6NSJ0 714 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 CREG2Q8IUH2 290 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 TBC1D3Q8IZP1 549 aaPredicted RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 C12orf50Q8NA57 414 aaPredicted RBP14.27□□□□□ -0.13
RNF4-202ENST00000502316 SPATA22Q8NHS9 363 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
RNF4-202ENST00000502316 PDCD6IPQ8WUM4 868 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms