RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 BCAT2O15382 392 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-210ENST00000498739 SPINT1O43278 529 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 LATO43561 262 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 TSPAN6O43657 245 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 SOCS5O75159 536 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 PRKCGP05129 697 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ITIH2P19823 946 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ATP5OP48047 213 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 TRAF2Q12933 501 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 UGP2Q16851 508 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 AASDHQ4L235 1098 aaPredicted RBP16.91■□□□□ 0.3
PRKCB-210ENST00000498739 SEL1L3Q68CR1 1132 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ALG1LQ6GMV1 187 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 SLC23A3Q6PIS1 610 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 REXO1L1PQ8IX06 675 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 CNTD1Q8N815 330 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 KLK6Q92876 244 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ECHDC3Q96DC8 303 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 FEM1CQ96JP0 617 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 QKIQ96PU8 341 aaKnown RBP eCLIP16.91■□□□□ 0.36e-7■■■■■ 48.1
PRKCB-210ENST00000498739 FAM118BQ9BPY3 351 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ORAI3Q9BRQ5 295 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 TM9SF3Q9HD45 589 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 FSCN3Q9NQT6 498 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 TRMT1Q9NXH9 659 aaKnown RBP16.91■□□□□ 0.3
PRKCB-210ENST00000498739 SLC6A14Q9UN76 642 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ZFR2Q9UPR6 939 aaKnown RBP16.91■□□□□ 0.3
PRKCB-210ENST00000498739 ATP8A1Q9Y2Q0 1164 aa16.91■□□□□ 0.3
PRKCB-210ENST00000498739 HACD1B0YJ81 288 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 PRR5-ARHGAP8B1AHC4 643 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 AREL1O15033 823 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 FOXD2O60548 495 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-210ENST00000498739 CPP00450 1065 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 SERPINF2P08697 491 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 CES1P23141 567 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 SUOXP51687 545 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 POLR2LP62875 67 aaKnown RBP16.9■□□□□ 0.3
PRKCB-210ENST00000498739 IRX4P78413 519 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 ELP6Q0PNE2 266 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 XRCC4Q13426 336 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 SETMARQ53H47 684 aaPredicted RBP16.9■□□□□ 0.3
PRKCB-210ENST00000498739 SLC45A4Q5BKX6 768 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 KIAA1161Q6NSJ0 714 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 ERAP2Q6P179 960 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 C1orf216Q8TAB5 229 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 ARRDC2Q8TBH0 407 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 SERAC1Q96JX3 654 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 SLC6A18Q96N87 628 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 PCDH12Q9NPG4 1184 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 AASDHPPTQ9NRN7 309 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 PCDHB9Q9Y5E1 797 aa16.9■□□□□ 0.3
PRKCB-210ENST00000498739 A0A1W2PQ67 120 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 KCNK3O14649 394 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 SLC31A1O15431 190 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 MTSS1O43312 755 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 HTRA2O43464 458 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-210ENST00000498739 PRLRP16471 622 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 PTPN3P26045 913 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 NUDT1P36639 197 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 EIF3EP60228 445 aaKnown RBP16.89■□□□□ 0.29
PRKCB-210ENST00000498739 RPS21P63220 83 aaKnown RBP16.89■□□□□ 0.29
PRKCB-210ENST00000498739 LMNB2Q03252 620 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 NIPAL4Q0D2K0 466 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 NUMA1Q14980 2115 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 ZNF284Q2VY69 593 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 TMEM259Q4ZIN3 620 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 TEX44Q53QW1 395 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 ARMC12Q5T9G4 340 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 ADAT2Q7Z6V5 191 aaKnown RBP16.89■□□□□ 0.29
PRKCB-210ENST00000498739 CDKL3Q8IVW4 592 aaPredicted RBP16.89■□□□□ 0.29
PRKCB-210ENST00000498739 CXorf40AQ8TE69 158 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 HTR3CQ8WXA8 447 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 MYOCQ99972 504 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 WRAP53Q9BUR4 548 aaKnown RBP16.89■□□□□ 0.29
PRKCB-210ENST00000498739 C10orf88Q9H8K7 445 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 CAPN10Q9HC96 672 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 RXFP3Q9NSD7 469 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 DMTF1Q9Y222 760 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 RAI2Q9Y5P3 530 aa16.89■□□□□ 0.29
PRKCB-210ENST00000498739 ZFHX2Q9C0A1 2572 aaPredicted RBP16.88■□□□□ 0.29
PRKCB-210ENST00000498739 LNP1A1A4G5 178 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 RIOK3O14730 519 aaKnown RBP16.88■□□□□ 0.29
PRKCB-210ENST00000498739 GDF9O60383 454 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 MMP20O60882 483 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 PGLSO95336 258 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 RBP3P10745 1247 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 ENGP17813 658 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 RBL1P28749 1068 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 CD86P42081 329 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 CSNK1EP49674 416 aaKnown RBP16.88■□□□□ 0.29
PRKCB-210ENST00000498739 AFF3P51826 1226 aaKnown RBP16.88■□□□□ 0.29
PRKCB-210ENST00000498739 RACK1P63244 317 aaKnown RBP16.88■□□□□ 0.29
PRKCB-210ENST00000498739 FAM193AP78312 1265 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 SEMG2Q02383 582 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 WASHC5Q12768 1159 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 KLF1Q13351 362 aaPredicted RBP16.88■□□□□ 0.29
PRKCB-210ENST00000498739 TEAD4Q15561 434 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 NAPEPLDQ6IQ20 393 aa16.88■□□□□ 0.29
PRKCB-210ENST00000498739 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms