RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 VOPP1Q96AW1 172 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 ZNF641Q96N77 438 aaPredicted RBP15.5■□□□□ 0.07
NUP50-219ENST00000497960 CSPG4P5Q96PW8 444 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 TUBGCP5Q96RT8 1024 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 C1QTNF2Q9BXJ5 285 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 CALN1Q9BXU9 219 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 LACRTQ9GZZ8 138 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 SUV39H2Q9H5I1 410 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 PCDH18Q9HCL0 1135 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 KLHL11Q9NVR0 708 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 ITM2BQ9Y287 266 aa15.5■□□□□ 0.07
NUP50-219ENST00000497960 A0A0U1RQJ8 604 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 FPGTO14772 594 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 SPOPO43791 374 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 PIGNO95427 931 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 TIMP2P16035 220 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 SERPINB6P35237 376 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 CSNK1DP48730 415 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 RENBPP51606 427 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 CDH6P55285 790 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 SLC25A11Q02978 314 aaKnown RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 BNIP3Q12983 259 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 IFI16Q16666 785 aaKnown RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 LRRC73Q5JTD7 316 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 TMCO4Q5TGY1 634 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 TXNRD3NBQ6F5E7 133 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 KYAT3Q6YP21 454 aaKnown RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 ARHGAP36Q6ZRI8 547 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 Q6ZSR6 202 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 SRLQ86TD4 932 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 PAF1Q8N7H5 531 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 OR13H1Q8NG92 308 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 CALR3Q96L12 384 aaKnown RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 LENG8Q96PV6 779 aaPredicted RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 C1QTNF7Q9BXJ2 289 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 ATP13A3Q9H7F0 1226 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 RCOR3Q9P2K3 495 aaPredicted RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 SEPT3Q9UH03 358 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 GGT7Q9UJ14 662 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 KLK13Q9UKR3 277 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 MSRB2Q9Y3D2 182 aa15.49■□□□□ 0.07
NUP50-219ENST00000497960 GOLGA4Q13439 2230 aaKnown RBP15.49■□□□□ 0.07
NUP50-219ENST00000497960 TP53BP1Q12888 1972 aaPredicted RBP15.48■□□□□ 0.07
NUP50-219ENST00000497960 RAD51BO15315 384 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 TM7SF2O76062 418 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 LDOC1O95751 146 aaPredicted RBP15.48■□□□□ 0.07
NUP50-219ENST00000497960 SERPINA4P29622 427 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 RABIFP47224 123 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 NSUN2Q08J23 767 aaKnown RBP eCLIP15.48■□□□□ 0.07
NUP50-219ENST00000497960 ELP6Q0PNE2 266 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 CCDC157Q569K6 752 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 C11orf63Q6NUN7 778 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 ERAP2Q6P179 960 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 BRAT1Q6PJG6 821 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 UNQ6494/PRO21346Q6UXR6 183 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 DAAM2Q86T65 1068 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 CPNE8Q86YQ8 564 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 BBS5Q8N3I7 341 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 EID2Q8N6I1 236 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 DENND6BQ8NEG7 585 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 TPCN2Q8NHX9 752 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 NSMCE1Q8WV22 266 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 CNDP2Q96KP4 475 aaKnown RBP15.48■□□□□ 0.07
NUP50-219ENST00000497960 BMFQ96LC9 184 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 ZNF599Q96NL3 588 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 ETNK2Q9NVF9 386 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 SALL4Q9UJQ4 1053 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 GUCA1BQ9UMX6 200 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 PPP2R2CQ9Y2T4 447 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 DUSP10Q9Y6W6 482 aa15.48■□□□□ 0.07
NUP50-219ENST00000497960 ARID1BQ8NFD5 2236 aaPredicted RBP15.47■□□□□ 0.07
NUP50-219ENST00000497960 TSPAN11A1L157 253 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 POM121BA6NF01 834 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 SPINT1O43278 529 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 BUB1BO60566 1050 aaPredicted RBP15.47■□□□□ 0.07
NUP50-219ENST00000497960 MMP20O60882 483 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 SDC3O75056 442 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 HSPA9P38646 679 aaKnown RBP15.47■□□□□ 0.07
NUP50-219ENST00000497960 SLC1A1P43005 524 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 RGRP47804 291 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 BCL2L1Q07817 233 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 ZNF235Q14590 738 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 LBRQ14739 615 aaKnown RBP15.47■□□□□ 0.07
NUP50-219ENST00000497960 ST3GAL2Q16842 350 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 UGP2Q16851 508 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 HS1BP3Q53T59 392 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 ZFYVE27Q5T4F4 411 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 CAMK1DQ8IU85 385 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 TP53INP2Q8IXH6 220 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 ATPAF2Q8N5M1 289 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 KCTD6Q8NC69 237 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 IFT43Q96FT9 208 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 PSKH2Q96QS6 385 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 KLF6Q99612 283 aaPredicted RBP15.47■□□□□ 0.07
NUP50-219ENST00000497960 GOLPH3Q9H4A6 298 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 LZTFL1Q9NQ48 299 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 TOR4AQ9NXH8 423 aa15.47■□□□□ 0.07
NUP50-219ENST00000497960 HYOU1Q9Y4L1 999 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms