RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 MLPHQ9BV36 600 aaPredicted RBP12□□□□□ -0.49
CUX1-210ENST00000497815 TDRD1Q9BXT4 1180 aaKnown RBP12□□□□□ -0.49
CUX1-210ENST00000497815 HDAC8Q9BY41 377 aa12□□□□□ -0.49
CUX1-210ENST00000497815 PCDH9Q9HC56 1237 aa12□□□□□ -0.49
CUX1-210ENST00000497815 RAB6BQ9NRW1 208 aa12□□□□□ -0.49
CUX1-210ENST00000497815 USP36Q9P275 1121 aaKnown RBP12□□□□□ -0.49
CUX1-210ENST00000497815 PAK5Q9P286 719 aa12□□□□□ -0.49
CUX1-210ENST00000497815 FAM153AQ9UHL3 310 aa12□□□□□ -0.49
CUX1-210ENST00000497815 MRFAP1Q9Y605 127 aa12□□□□□ -0.49
CUX1-210ENST00000497815 IGHV1OR15-9A0A0B4J2B8 117 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 A8MX80 341 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 E7EVH7 732 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 H0Y858 1186 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 MAP3K13O43283 966 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 HTRA2O43464 458 aaPredicted RBP11.99□□□□□ -0.49
CUX1-210ENST00000497815 ANXA9O76027 345 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 PGLSO95336 258 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 GAS8O95995 478 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ADRB3P13945 408 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 TIMP2P16035 220 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 CTPS1P17812 591 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 CD6P30203 668 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ACSL1P33121 698 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ABL2P42684 1182 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 LMAN1P49257 510 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 NUBP1P53384 320 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 EPHB1P54762 984 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 GEMP55040 296 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 WNT3AP56704 352 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 MRPS25P82663 173 aaKnown RBP11.99□□□□□ -0.49
CUX1-210ENST00000497815 DR1Q01658 176 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 GPS1Q13098 491 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 OLIG2Q13516 323 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 PTPRRQ15256 657 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 PPP1R7Q15435 360 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 MAP7D1Q3KQU3 841 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ZNF528Q3MIS6 628 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 PIP5KL1Q5T9C9 394 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 AGBL4Q5VU57 503 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 BRAT1Q6PJG6 821 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 KDELC1Q6UW63 502 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 USP30Q70CQ3 517 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 KBTBD6Q86V97 674 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 SLC25A41Q8N5S1 370 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 DEFB119Q8N690 84 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 OR14C36Q8NHC7 312 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 TADA1Q96BN2 335 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 RMDN1Q96DB5 314 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ECHDC3Q96DC8 303 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 TOE1Q96GM8 510 aaKnown RBP11.99□□□□□ -0.49
CUX1-210ENST00000497815 SMIM14Q96QK8 99 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 APOL2Q9BQE5 337 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 FICDQ9BVA6 458 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 FSD1LQ9BXM9 530 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 BTBD1Q9H0C5 482 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ETNK1Q9HBU6 452 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 DKK3Q9UBP4 350 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 FEZ2Q9UHY8 353 aaPredicted RBP11.99□□□□□ -0.49
CUX1-210ENST00000497815 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 FZD4Q9ULV1 537 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 ITM2BQ9Y287 266 aa11.99□□□□□ -0.49
CUX1-210ENST00000497815 AAR2Q9Y312 384 aaKnown RBP11.99□□□□□ -0.49
CUX1-210ENST00000497815 MYO18AQ92614 2054 aaKnown RBP11.99□□□□□ -0.49
CUX1-210ENST00000497815 CCDC163A0A0D9SF12 145 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 TSPAN11A1L157 253 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 UPK3BL1B0FP48 263 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 UPK3BL2E5RIL1 263 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 NEMP1O14524 444 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 FZD6O60353 706 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 NDUFS2O75306 463 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 USP12O75317 370 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 RPP40O75818 363 aaKnown RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 AGTP01019 485 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 ALPIP09923 528 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 C7P10643 843 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 BCKDHBP21953 392 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 OXTRP30559 389 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 PTGIRP43119 386 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 CHRNA4P43681 627 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 TNNT3P45378 269 aaPredicted RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 ADPRHP54922 357 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 TAS2R38P59533 333 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 POLR2LP62875 67 aaKnown RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 FAM193AP78312 1265 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 BASP1P80723 227 aaKnown RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 CDK18Q07002 472 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 CCDC15Q0P6D6 951 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 MPP3Q13368 585 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 TUBB2AQ13885 445 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 UGP2Q16851 508 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 PDCD7Q8N8D1 485 aaKnown RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 PRSS33Q8NF86 280 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 RUNDC3BQ96NL0 473 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 TUBB2BQ9BVA1 445 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 GPR174Q9BXC1 333 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 ADGRE3Q9BY15 652 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 FAM126AQ9BYI3 521 aaPredicted RBP11.98□□□□□ -0.49
CUX1-210ENST00000497815 PCDH12Q9NPG4 1184 aa11.98□□□□□ -0.49
CUX1-210ENST00000497815 VPS45Q9NRW7 570 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms