RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 ZSWIM9Q86XI8 627 aa18.86■□□□□ 0.61
RPN1-208ENST00000497415 GATAD2AQ86YP4 633 aa18.86■□□□□ 0.61
RPN1-208ENST00000497415 DCP2Q8IU60 420 aaKnown RBP18.86■□□□□ 0.61
RPN1-208ENST00000497415 CCDC170Q8IYT3 715 aa18.86■□□□□ 0.61
RPN1-208ENST00000497415 PQLC3Q8N755 202 aa18.86■□□□□ 0.61
RPN1-208ENST00000497415 KLHL11Q9NVR0 708 aa18.86■□□□□ 0.61
RPN1-208ENST00000497415 POM121BA6NF01 834 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 ZNF487B1APH4 448 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 TRAFD1O14545 582 aaPredicted RBP18.85■□□□□ 0.61
RPN1-208ENST00000497415 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
RPN1-208ENST00000497415 MMP20O60882 483 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 TRIM16O95361 564 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 ITGAVP06756 1048 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 FECHP22830 423 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 XPAP23025 273 aaPredicted RBP18.85■□□□□ 0.61
RPN1-208ENST00000497415 SLC1A1P43005 524 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 MAGEA1P43355 309 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 HADHBP55084 474 aaKnown RBP18.85■□□□□ 0.61
RPN1-208ENST00000497415 BCL2L1Q07817 233 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 GALNT2Q10471 571 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 BNIP3Q12983 259 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 ZNF235Q14590 738 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 LRRC38Q5VT99 294 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 Q6ZSR6 202 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 VSIG1Q86XK7 387 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 SLC22A18ASQ8N1D0 253 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 PGBD5Q8N414 524 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 TEX26Q8N6G2 289 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 CXorf40AQ8TE69 158 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 SPOCK2Q92563 424 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 RAPGEF5Q92565 580 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 CENPTQ96BT3 561 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 PANX2Q96RD6 677 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 MGME1Q9BQP7 344 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 PCDH12Q9NPG4 1184 aa18.85■□□□□ 0.61
RPN1-208ENST00000497415 ARID1BQ8NFD5 2236 aaPredicted RBP18.85■□□□□ 0.61
RPN1-208ENST00000497415 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.84■□□□□ 0.61
RPN1-208ENST00000497415 FPGTO14772 594 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 TM7SF2O76062 418 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 DKK1O94907 266 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 TOP3BO95985 862 aaKnown RBP18.84■□□□□ 0.61
RPN1-208ENST00000497415 FTH1P19P0C7X4 201 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 GARSP41250 739 aaKnown RBP18.84■□□□□ 0.61
RPN1-208ENST00000497415 RALGPS1Q5JS13 557 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 MARC1Q5VT66 337 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 SLCO6A1Q86UG4 719 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 BBS5Q8N3I7 341 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 NSMCE1Q8WV22 266 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 FATE1Q969F0 183 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 IFT43Q96FT9 208 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 TSGA13Q96PP4 275 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 RNF157Q96PX1 679 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 NUDCD1Q96RS6 583 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 TOR4AQ9NXH8 423 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 ATP8A1Q9Y2Q0 1164 aa18.84■□□□□ 0.61
RPN1-208ENST00000497415 TDRD6O60522 2096 aaKnown RBP18.83■□□□□ 0.61
RPN1-208ENST00000497415 CFAP69A5D8W1 941 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 C3orf70A6NLC5 250 aaPredicted RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 HTRA2O43464 458 aaPredicted RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 TNFSF14O43557 240 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 MMP12P39900 470 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 MMP13P45452 471 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 RABIFP47224 123 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 PFN3P60673 137 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 POLR2LP62875 67 aaKnown RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 AGERQ15109 404 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 CFAP58Q5T655 872 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 ERAP2Q6P179 960 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 PTAR1Q7Z6K3 402 aaPredicted RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 RAB44Q7Z6P3 723 aaPredicted RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 TP53I13Q8NBR0 393 aaPredicted RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 ADAMTS14Q8WXS8 1223 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 MAML1Q92585 1016 aa18.83■□□□□ 0.6
RPN1-208ENST00000497415 WRAP53Q9BUR4 548 aaKnown RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 APOBEC2Q9Y235 224 aaKnown RBP18.83■□□□□ 0.6
RPN1-208ENST00000497415 SPTY2D1-AS1A0A0U1RR47 76 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 A0A1W2PQ67 120 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 TTC24A2A3L6 582 aaPredicted RBP18.82■□□□□ 0.6
RPN1-208ENST00000497415 LRRD1A4D1F6 860 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 MATN3O15232 486 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 SOCS5O75159 536 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 ATXN1LP0C7T5 689 aaKnown RBP18.82■□□□□ 0.6
RPN1-208ENST00000497415 CCNCP24863 283 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 CYLC1P35663 651 aaPredicted RBP18.82■□□□□ 0.6
RPN1-208ENST00000497415 SLC10A2Q12908 348 aaPredicted RBP18.82■□□□□ 0.6
RPN1-208ENST00000497415 IFI16Q16666 785 aaKnown RBP18.82■□□□□ 0.6
RPN1-208ENST00000497415 ZFYVE27Q5T4F4 411 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 TIGD7Q6NT04 549 aaPredicted RBP18.82■□□□□ 0.6
RPN1-208ENST00000497415 RHOT1Q8IXI2 618 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 CNTNAP3BQ96NU0 1288 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 SCNM1Q9BWG6 230 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 C1QTNF7Q9BXJ2 289 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 CNTNAP3Q9BZ76 1288 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 NOD2Q9HC29 1040 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 SCUBE2Q9NQ36 999 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 PCDHA13Q9Y5I0 950 aa18.82■□□□□ 0.6
RPN1-208ENST00000497415 FAM221BA6H8Z2 402 aa18.81■□□□□ 0.6
RPN1-208ENST00000497415 TOR1BO14657 336 aa18.81■□□□□ 0.6
RPN1-208ENST00000497415 HYAL3O43820 417 aaPredicted RBP18.81■□□□□ 0.6
RPN1-208ENST00000497415 PRKCGP05129 697 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms