RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 EIF3CQ99613 913 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 EPAS1Q99814 870 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 C11orf70Q9BRQ4 267 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 LRRC61Q9BV99 259 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 SELENOOQ9BVL4 669 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 GANQ9H2C0 597 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 SAMSN1Q9NSI8 373 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 ADAM22Q9P0K1 906 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 DOLKQ9UPQ8 538 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 PCDHGA7Q9Y5G6 932 aa17.03■□□□□ 0.32
TRAPPC3-207ENST00000497251 ATMQ13315 3056 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TSPAN11A1L157 253 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 K7ENP7 123 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 NTN3O00634 580 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 MUSKO15146 869 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 MMP20O60882 483 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 RASGRP1O95267 797 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 MYF5P13349 255 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 PLA2G2AP14555 144 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TIMP2P16035 220 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TSHRP16473 764 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 CHRNB2P17787 502 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 GPD1P21695 349 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 GKP32189 559 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 RFC1P35251 1148 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 ZNF143P52747 638 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 HK3P52790 923 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 POLR2FP61218 127 aaKnown RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 SERINC3Q13530 473 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 SYCP1Q15431 976 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TPRG1LQ5T0D9 272 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 ARHGAP40Q5TG30 622 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 ERAP2Q6P179 960 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 INO80CQ6PI98 192 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 PCSK4Q6UW60 755 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 GKN2Q86XP6 184 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 ZNF354CQ86Y25 554 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 DNAAF5Q86Y56 855 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TP53I13Q8NBR0 393 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TMEM159Q96B96 161 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 PRR11Q96HE9 360 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 TUBGCP5Q96RT8 1024 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 STRADBQ9C0K7 418 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 ITM2BQ9Y287 266 aa17.02■□□□□ 0.32
TRAPPC3-207ENST00000497251 MBD3O95983 291 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 CCDC172P0C7W6 258 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 CTSEP14091 401 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 CSNK1DP48730 415 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 PTP4A2Q12974 167 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 UGP2Q16851 508 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 KLHL40Q2TBA0 621 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 ATXN7L2Q5T6C5 722 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 WDR59Q6PJI9 974 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 RBFAQ8N0V3 343 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 ANKRD20A12PQ8NF67 263 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 JOSD2Q8TAC2 188 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 SLC30A5Q8TAD4 765 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 SLC20A1Q8WUM9 679 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 TMEM74Q96NL1 305 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 NCAPGQ9BPX3 1015 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 CCDC3Q9BQI4 270 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 EDEM3Q9BZQ6 932 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 SUV39H2Q9H5I1 410 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 GGT7Q9UJ14 662 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 ACSL6Q9UKU0 697 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 ACTL7AQ9Y615 435 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 UNC13CQ8NB66 2214 aa17.01■□□□□ 0.31
TRAPPC3-207ENST00000497251 PIEZO2Q9H5I5 2752 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 RASA4BC9J798 803 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 J3QKU1 62 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 RASA4O43374 803 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 HOXC4P09017 264 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-207ENST00000497251 PNLIPP16233 465 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 KELP23276 732 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 NDST2P52849 883 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 MTM1Q13496 603 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 NFATC4Q14934 902 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 CLEC16AQ2KHT3 1053 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 HSP90AA4PQ58FG1 418 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 PERM1Q5SV97 790 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 CFAP58Q5T655 872 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 TTC9Q92623 222 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 HMCESQ96FZ2 354 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 CNPY3Q9BT09 278 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 CLPBQ9H078 707 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 NOL6Q9H6R4 1146 aaKnown RBP17■□□□□ 0.31
TRAPPC3-207ENST00000497251 CPNE5Q9HCH3 593 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 FAM207AQ9NSI2 230 aaPredicted RBP17■□□□□ 0.31
TRAPPC3-207ENST00000497251 EIF2AK3Q9NZJ5 1116 aaKnown RBP17■□□□□ 0.31
TRAPPC3-207ENST00000497251 DGKBQ9Y6T7 804 aa17■□□□□ 0.31
TRAPPC3-207ENST00000497251 PLD2O14939 933 aa16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 TNFSF15O95150 251 aa16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 C6P13671 934 aa16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 CCKBRP32239 447 aa16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 ZNF135P52742 658 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 POLR2LP62875 67 aaKnown RBP16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 C1orf61Q13536 156 aa16.99■□□□□ 0.31
TRAPPC3-207ENST00000497251 IRF4Q15306 451 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms