RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, human

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTBN1-205	ENST00000496323	SIRPG	Q9P1W8	387 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	FCF1	Q9Y324	198 aa	Known RBP	13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	OBSL1	O75147	1896 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	AURKA	O14965	403 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	GLRA3	O75311	464 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	FGF19	O95750	216 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	AVPR1A	P37288	418 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	LMAN2	Q12907	356 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	THOC5	Q13769	683 aa	Known RBP	13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	PTPRCAP	Q14761	206 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	PRSS36	Q5K4E3	855 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	NLRP9	Q7RTR0	991 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	CLEC14A	Q86T13	490 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	PLD6	Q8N2A8	252 aa	Known RBP	13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	CCDC63	Q8NA47	563 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	GRAMD1A	Q96CP6	724 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	LMLN	Q96KR4	655 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	ZSWIM3	Q96MP5	696 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	SMIM14	Q96QK8	99 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	ZNF358	Q9NW07	568 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	2e-10	■□□□□ 11.1
SPTBN1-205	ENST00000496323	TMEM216	Q9P0N5	145 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	DCDC2	Q9UHG0	476 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	FBXO5	Q9UKT4	447 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	SLC39A10	Q9ULF5	831 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	PCDHGC4	Q9Y5F7	938 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	SPO11	Q9Y5K1	396 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	RAI2	Q9Y5P3	530 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	HCFC2	Q9Y5Z7	792 aa		13.78	□□□□□ -0.2
SPTBN1-205	ENST00000496323	CDH23	Q9H251	3354 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323		A0A096LPK6	155 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	BUD23	O43709	281 aa	Known RBP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	PLIN3	O60664	434 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	PRAMEF12	O95522	483 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	C2	P06681	752 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	BPGM	P07738	259 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	CES1	P23141	567 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	DDX6	P26196	483 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	CD70	P32970	193 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	IRX4	P78413	519 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	IRF9	Q00978	393 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ACVR1	Q04771	509 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	NCEH1	Q6PIU2	408 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	YTHDF3	Q7Z739	585 aa	Known RBP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ANKS4B	Q8N8V4	417 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	FIBIN	Q8TAL6	211 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	BRSK1	Q8TDC3	778 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	HDAC10	Q969S8	669 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ZNF707	Q96C28	371 aa	Predicted RBP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	THOC1	Q96FV9	657 aa	Known RBP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	FAM167B	Q9BTA0	163 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	PRDM4	Q9UKN5	801 aa		13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	INTS6	Q9UL03	887 aa	Known RBP	13.77	□□□□□ -0.21
SPTBN1-205	ENST00000496323	KLF11	O14901	512 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	SLC7A4	O43246	635 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	SMAD6	O43541	496 aa	Known RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	HAUS5	O94927	633 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	TRAF2	Q12933	501 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	SHH	Q15465	462 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	UGP2	Q16851	508 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	INSC	Q1MX18	579 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ZNF789	Q5FWF6	425 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ADGRD2	Q7Z7M1	963 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	RBM23	Q86U06	439 aa	Known RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	DNAJC1	Q96KC8	554 aa	Known RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	HTATIP2	Q9BUP3	242 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	TDP1	Q9NUW8	608 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	YBX2	Q9Y2T7	364 aa	Known RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ATXN2	Q99700	1313 aa	Known RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	OR51F1	A6NGY5	319 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	PROC	P04070	461 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	MPO	P05164	745 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	HADHA	P40939	763 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	SPRED3	Q2MJR0	410 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	SRL	Q86TD4	932 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	TMEM25	Q86YD3	366 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	CCT6B	Q92526	530 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	TBATA	Q96M53	351 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	MFSD1	Q9H3U5	465 aa		13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.76	□□□□□ -0.21
SPTBN1-205	ENST00000496323	CCDC195	A0A1B0GUA6	201 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	CCT8L1P	A6NM43	557 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	BIRC5	O15392	142 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	XYLB	O75191	536 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ERVK-21	P61565	698 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	RHOA	P61586	193 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	TMPRSS15	P98073	1019 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	GPM6B	Q13491	265 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	USP10	Q14694	798 aa	Known RBP	13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	PLEKHG6	Q3KR16	790 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	ARHGAP15	Q53QZ3	475 aa		13.75	□□□□□ -0.21
SPTBN1-205	ENST00000496323	CNST	Q6PJW8	725 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms