RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 ERAP2Q6P179 960 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 Q6ZSR6 202 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 CAMK1DQ8IU85 385 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 TC2NQ8N9U0 490 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 RFFLQ8WZ73 363 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 CNTNAP3BQ96NU0 1288 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 KLF6Q99612 283 aaPredicted RBP17.21■□□□□ 0.35
COMMD3-214ENST00000496071 SCNM1Q9BWG6 230 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 CNTNAP3Q9BZ76 1288 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 FTSJ1Q9UET6 329 aa17.21■□□□□ 0.35
COMMD3-214ENST00000496071 POM121BA6NF01 834 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 TMEM110-MUSTN1A8MSY1 372 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 TOR1BO14657 336 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 RAD51BO15315 384 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 MMP20O60882 483 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 PEX11BO96011 259 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 CD48P09326 243 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 RALGPS1Q5JS13 557 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 LRRC73Q5JTD7 316 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 MARC1Q5VT66 337 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 PTAR1Q7Z6K3 402 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-214ENST00000496071 RAB44Q7Z6P3 723 aaPredicted RBP17.2■□□□□ 0.34
COMMD3-214ENST00000496071 PAF1Q8N7H5 531 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 CENPTQ96BT3 561 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 ECHDC3Q96DC8 303 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 MRFAP1L1Q96HT8 127 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 RBSNQ9H1K0 784 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 GPR27Q9NS67 375 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 NEUROG3Q9Y4Z2 214 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 SHROOM3Q8TF72 1996 aa17.2■□□□□ 0.34
COMMD3-214ENST00000496071 CFAP69A5D8W1 941 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 RIOK3O14730 519 aaKnown RBP17.19■□□□□ 0.34
COMMD3-214ENST00000496071 MUSKO15146 869 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 HYAL3O43820 417 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-214ENST00000496071 LDOC1O95751 146 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-214ENST00000496071 KDELR1P24390 212 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 SLC1A1P43005 524 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 NCBP2-AS2Q69YL0 99 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 TIGD7Q6NT04 549 aaPredicted RBP17.19■□□□□ 0.34
COMMD3-214ENST00000496071 SLCO6A1Q86UG4 719 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 CPNE8Q86YQ8 564 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 CCDC170Q8IYT3 715 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 CHCHD4Q8N4Q1 142 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 EID2Q8N6I1 236 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 PCDH19Q8TAB3 1148 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 FAF2Q96CS3 445 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 NUDCD1Q96RS6 583 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 PCDH12Q9NPG4 1184 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 HAUS2Q9NVX0 235 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 ATP8A1Q9Y2Q0 1164 aa17.19■□□□□ 0.34
COMMD3-214ENST00000496071 SPTY2D1-AS1A0A0U1RR47 76 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 FAM221BA6H8Z2 402 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 ZNF487B1APH4 448 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 TRAFD1O14545 582 aaPredicted RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 LCA5LO95447 670 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 TOP3BO95985 862 aaKnown RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 ATXN1LP0C7T5 689 aaKnown RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 ITIH2P19823 946 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 CR2P20023 1033 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 GARSP41250 739 aaKnown RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 MAGEA1P43355 309 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 MMP13P45452 471 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 ZNF75DP51815 510 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 PFN3P60673 137 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 YPEL5P62699 121 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 GALNT2Q10471 571 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 PTK2BQ14289 1009 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 IFI16Q16666 785 aaKnown RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 LRRC38Q5VT99 294 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 KANSL1Q7Z3B3 1105 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 VSIG1Q86XK7 387 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 SLC22A18ASQ8N1D0 253 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 PIP4P2Q8N4L2 257 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 PNPLA1Q8N8W4 532 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 SPOCK2Q92563 424 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 MGME1Q9BQP7 344 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 WRAP53Q9BUR4 548 aaKnown RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 LUC7LQ9NQ29 371 aaKnown RBP17.18■□□□□ 0.34
COMMD3-214ENST00000496071 SCUBE2Q9NQ36 999 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 TOR4AQ9NXH8 423 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 MSRB2Q9Y3D2 182 aa17.18■□□□□ 0.34
COMMD3-214ENST00000496071 ENC1O14682 589 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 MFSD11O43934 449 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 SOCS5O75159 536 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 DKK1O94907 266 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 CDK4P11802 303 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 SPINK2P20155 84 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 MX2P20592 715 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 CCNCP24863 283 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 NFKBIAP25963 317 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 CYLC1P35663 651 aaPredicted RBP17.17■□□□□ 0.34
COMMD3-214ENST00000496071 MMP12P39900 470 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 THOP1P52888 689 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 HNRNPKP61978 463 aaKnown RBP eCLIP17.17■□□□□ 0.34
COMMD3-214ENST00000496071 AGERQ15109 404 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 HS1BP3Q53T59 392 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 ODF2Q5BJF6 829 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 PARGQ86W56 976 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 ZSWIM9Q86XI8 627 aa17.17■□□□□ 0.34
COMMD3-214ENST00000496071 PGBD5Q8N414 524 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms