RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP39-219ENST00000496047 SIRPGQ9P1W8 387 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 TBX21Q9UL17 535 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 SORCS3Q9UPU3 1222 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 APOBEC2Q9Y235 224 aaKnown RBP6.99□□□□□ -1.29
USP39-219ENST00000496047 RWDD3Q9Y3V2 267 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 INSL5Q9Y5Q6 135 aa6.99□□□□□ -1.29
USP39-219ENST00000496047 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 A0A1W2PPC1 479 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ZNF840PA6NDX5 716 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 F8W8V4 182 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 H0Y626 953 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SLC7A4O43246 635 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 COCHO43405 550 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ABLIM3O94929 683 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 UNC5CO95185 931 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 VAPBO95292 243 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 HSPA4LO95757 839 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 GLP2RO95838 553 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 TIMP1P01033 207 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 EPOP01588 193 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ALDOAP04075 364 aaKnown RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 CYBBP04839 570 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ADH1AP07327 375 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 IRF1P10914 325 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 RALBP11234 206 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 MYL4P12829 197 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 CPA3P15088 417 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 NQO1P15559 274 aaKnown RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 TPH1P17752 444 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 CDC25CP30307 473 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SLC8A1P32418 973 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ADRA1AP35348 466 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SERPINB5P36952 375 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 PPARGP37231 505 aaPredicted RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 MAGEA12P43365 314 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 MAPK8P45983 427 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SLC1A6P48664 564 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 RAB10P61026 200 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 INSM1Q01101 510 aaPredicted RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 POU4F1Q01851 419 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 DSC2Q02487 901 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 BST1Q10588 318 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 TWF1Q12792 350 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 BNIP1Q12981 228 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 PPIGQ13427 754 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP39-219ENST00000496047 PDE1CQ14123 709 aaPredicted RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 GPNMBQ14956 572 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SNCBQ16143 134 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 FAM83EQ2M2I3 478 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 EML3Q32P44 896 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ALFQ53S48 1182 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ADGRF1Q5T601 910 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 TSTD2Q5T7W7 516 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 C6orf163Q5TEZ5 329 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 AGAP9Q5VTM2 703 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ZNF470Q6ECI4 717 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 FSTL4Q6MZW2 842 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 FAM45BPQ6NSW5 357 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 CGB2Q6NT52 195 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 MRNIPQ6NTE8 343 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 KDELC1Q6UW63 502 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP39-219ENST00000496047 SH2D5Q6ZV89 423 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 NECAB2Q7Z6G3 386 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SDCCAG8Q86SQ7 713 aaPredicted RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 DENND1CQ8IV53 801 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ZNF683Q8IZ20 524 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 FIBCD1Q8N539 461 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SLC25A41Q8N5S1 370 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ZNF557Q8N988 423 aaPredicted RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 PIWIL2Q8TC59 973 aaKnown RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 FAM45AQ8TCE6 357 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 STYXQ8WUJ0 223 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 DPF3Q92784 378 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 IGSF8Q969P0 613 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ATXN7L3BQ96GX2 97 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 MRGPRX2Q96LB1 330 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SEMA3CQ99985 751 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SPON2Q9BUD6 331 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 TMEM120AQ9BXJ8 343 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 EMILIN2Q9BXX0 1053 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ADGRE3Q9BY15 652 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 MYLK2Q9H1R3 596 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 CCDC68Q9H2F9 335 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 MTIF3Q9H2K0 278 aaKnown RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 TASP1Q9H6P5 420 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 PLAC1Q9HBJ0 212 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 NMRAL1Q9HBL8 299 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ALG13Q9NP73 1137 aaKnown RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 HACD3Q9P035 362 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 COPG2Q9UBF2 871 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 DCTN4Q9UJW0 460 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SLC39A10Q9ULF5 831 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 RIMKLBQ9ULI2 386 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ACOT9Q9Y305 439 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 SH3BP1Q9Y3L3 701 aa6.98□□□□□ -1.29
USP39-219ENST00000496047 ZFP37Q9Y6Q3 630 aaPredicted RBP6.98□□□□□ -1.29
USP39-219ENST00000496047 TRAV19A0A0A6YYK7 116 aa6.97□□□□□ -1.29
USP39-219ENST00000496047 C2orf81A6NN90 581 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms