RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 ZYG11BQ9C0D3 744 aa8.93□□□□□ -0.98
SORT1-208ENST00000495777 OSBPL2Q9H1P3 480 aa8.93□□□□□ -0.98
SORT1-208ENST00000495777 SYNCQ9H7C4 482 aa8.93□□□□□ -0.98
SORT1-208ENST00000495777 ATP13A1Q9HD20 1204 aa8.93□□□□□ -0.98
SORT1-208ENST00000495777 TMEM59LQ9UK28 342 aa8.93□□□□□ -0.98
SORT1-208ENST00000495777 PNMA8BQ9ULN7 279 aaPredicted RBP8.93□□□□□ -0.98
SORT1-208ENST00000495777 FCF1Q9Y324 198 aaKnown RBP8.93□□□□□ -0.98
SORT1-208ENST00000495777 EPN1Q9Y6I3 576 aaPredicted RBP8.93□□□□□ -0.98
SORT1-208ENST00000495777 SCINQ9Y6U3 715 aa8.93□□□□□ -0.98
SORT1-208ENST00000495777 COL6A6A6NMZ7 2263 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 COL27A1Q8IZC6 1860 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 CPED1A4D0V7 1026 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ANKRD62A6NC57 917 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 GOLGA6L9A6NEM1 432 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 C16orf96A6NNT2 1141 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 B8ZZF3 427 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 LMO7DNF2Z398 122 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 AREL1O15033 823 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 GCATO75600 419 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 NDUFA10O95299 355 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 MMP8P22894 467 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 RBMS1P29558 406 aaKnown RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 PDX1P52945 283 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 RNASE9P60153 205 aaKnown RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 NRG1Q02297 640 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 SGCGQ13326 291 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 NR0B2Q15466 257 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ASTE1Q2TB18 679 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 DEFB133Q30KQ1 61 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ZNF805Q5CZA5 627 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 C3orf38Q5JPI3 329 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 PERM1Q5SV97 790 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 FAM102AQ5T9C2 384 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 TAF3Q5VWG9 929 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ACAD10Q6JQN1 1059 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ALKBH5Q6P6C2 394 aaKnown RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 NLRP14Q86W24 1093 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 SLC35F3Q8IY50 421 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 SLC30A5Q8TAD4 765 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 LMX1AQ8TE12 382 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 CTNNBL1Q8WYA6 563 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 ARHGEF2Q92974 986 aaKnown RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 NAT6Q93015 286 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 C18orf8Q96DM3 657 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 CCDC97Q96F63 343 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 LRRC61Q9BV99 259 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 TSGA10Q9BZW7 698 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ISCUQ9H1K1 167 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 TCEAL2Q9H3H9 227 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 RETREG1Q9H6L5 497 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 MRPL47Q9HD33 250 aaKnown RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 HECAQ9UBI9 543 aaPredicted RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 SPASTQ9UBP0 616 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 IPO11Q9UI26 975 aaKnown RBP8.92□□□□□ -0.98
SORT1-208ENST00000495777 GGT7Q9UJ14 662 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 NEU3Q9UQ49 428 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ITM2BQ9Y287 266 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 ACTL7AQ9Y615 435 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 MYO18BQ8IUG5 2567 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 SHROOM3Q8TF72 1996 aa8.92□□□□□ -0.98
SORT1-208ENST00000495777 A0A087X0T9 212 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 PMS2P1A4D2B8 440 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 DDX3XO00571 662 aaKnown RBP eCLIP8.91□□□□□ -0.98
SORT1-208ENST00000495777 NTN3O00634 580 aaPredicted RBP8.91□□□□□ -0.98
SORT1-208ENST00000495777 TOR1BO14657 336 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 ZSCAN12O43309 604 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 SRGAP2O75044 1071 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 GSRP00390 522 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 H2AFZP0C0S5 128 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 CCDC175P0C221 793 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 FAM228BP0C875 321 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 SKILP12757 684 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 CHRNB2P17787 502 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 IGFALSP35858 605 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 ACVRL1P37023 503 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 ETFBP38117 255 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 MAPKAPK2P49137 400 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 RPIAP49247 311 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 GEMIN4P57678 1058 aaKnown RBP8.91□□□□□ -0.98
SORT1-208ENST00000495777 YPEL5P62699 121 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 CLN3Q13286 438 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 LY6DQ14210 128 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 IFI16Q16666 785 aaKnown RBP8.91□□□□□ -0.98
SORT1-208ENST00000495777 CCDC122Q5T0U0 273 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 C6orf132Q5T0Z8 1188 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 ZNF662Q6ZS27 426 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 H2AFVQ71UI9 128 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 FAM131BQ86XD5 332 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 TMEM139Q8IV31 216 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 RHOT2Q8IXI1 618 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 PHACTR4Q8IZ21 702 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 RBFAQ8N0V3 343 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 ARL14Q8N4G2 192 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 C3orf20Q8ND61 904 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 OR2AP1Q8NGE2 309 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 WDR36Q8NI36 951 aaKnown RBP8.91□□□□□ -0.98
SORT1-208ENST00000495777 SLC20A1Q8WUM9 679 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 GLMNQ92990 594 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 ARHGEF26Q96DR7 871 aa8.91□□□□□ -0.98
SORT1-208ENST00000495777 MED8Q96G25 268 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms