RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	SLC25A23	Q9BV35	468 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ABHD16B	Q9H3Z7	469 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ENTPD7	Q9NQZ7	604 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TMEM30A	Q9NV96	361 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SUCO	Q9UBS9	1254 aa	Known RBP	13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CASTOR2	A6NHX0	329 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ZNF135	P52742	658 aa	Predicted RBP	13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	C1QTNF8	P60827	252 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RHD	Q02161	417 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	UBXN11	Q5T124	520 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DHFR2	Q86XF0	187 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TICAM1	Q8IUC6	712 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	DQX1	Q8TE96	717 aa	Known RBP	13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FCRL5	Q96RD9	977 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MCMBP	Q9BTE3	642 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	NUDT5	Q9UKK9	219 aa		13.53	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PRORSD1P	A6NEY8	169 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SAC3D1	A6NKF1	404 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071		A8MT66	165 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PTGES	O14684	152 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MYL3	P08590	195 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	LTA4H	P09960	611 aa	Known RBP	13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CKMT2	P17540	419 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KCNA5	P22460	613 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CCNC	P24863	283 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	YWHAQ	P27348	245 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	GRIA3	P42263	894 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SAMD4B	Q5PRF9	694 aa	Known RBP	13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	BTBD8	Q5XKL5	378 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SMG8	Q8ND04	991 aa	Known RBP	13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RMND5B	Q96G75	393 aa	Predicted RBP	13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	OSBPL11	Q9BXB4	747 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	OSBPL2	Q9H1P3	480 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ALG9	Q9H6U8	611 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MRGBP	Q9NV56	204 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MYRF	Q9Y2G1	1151 aa		13.52	□□□□□ -0.24
SUPT20H-222	ENST00000495071	C7orf72	A4D263	438 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MEIS3P2	A8K0S8	358 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	NRP2	O60462	931 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PYGL	P06737	847 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RBP1	P09455	135 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	EPHX2	P34913	555 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PLOD1	Q02809	727 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IKBKE	Q14164	716 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MFSD10	Q14728	455 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RPS6KA2	Q15349	733 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LDB1	Q86U70	411 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TINF2	Q9BSI4	451 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CATSPERB	Q9H7T0	1116 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PREB	Q9HCU5	417 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GALNT8	Q9NY28	637 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TRAF6	Q9Y4K3	522 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	RBM47	A0AV96	593 aa	Known RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PDHX	O00330	501 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	NR5A2	O00482	541 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	GABRD	O14764	452 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TRMU	O75648	421 aa	Known RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF26	P17031	533 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PCSK1	P29120	753 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	POLD2	P49005	469 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CLCNKB	P51801	687 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TMED1	Q13445	227 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF789	Q5FWF6	425 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LPCAT2	Q7L5N7	544 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ABTB1	Q969K4	478 aa	Predicted RBP	13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MYLPF	Q96A32	169 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TSPAN17	Q96FV3	270 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC39A8	Q9C0K1	460 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071		A0A0G2JMZ2	1700 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LRRC37A2	A6NM11	1700 aa		13.52	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CCL22	O00626	93 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MSI1	O43347	362 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SEC24D	O94855	1032 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HLA-DQB2	P05538	268 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ARNT	P27540	789 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ARCN1	P48444	511 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CDH13	P55290	713 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	NLGN2	Q8NFZ4	835 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	CALML6	Q8TD86	181 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PGAP3	Q96FM1	320 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PHF12	Q96QT6	1004 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	ZNF638	Q14966	1978 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	TH	P07101	528 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HSPA1A	P0DMV8	641 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	HSPA1B	P0DMV9	641 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	WNT3A	P56704	352 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	IQSEC1	Q6DN90	963 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	DDIAS	Q8IXT1	998 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PCYOX1L	Q8NBM8	494 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	LPP	Q93052	612 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MAML3	Q96JK9	1138 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	MAEL	Q96JY0	434 aa	Known RBP	13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	OLFM1	Q99784	485 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	PRKD2	Q9BZL6	878 aa		13.51	□□□□□ -0.25
SUPT20H-222	ENST00000495071	SLC38A7	Q9NVC3	462 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms