RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 AIF1P55008 147 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 C1QBPQ07021 282 aaKnown RBP22.32■■□□□ 1.16
HDDC3-203ENST00000494993 ELP6Q0PNE2 266 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 IRF4Q15306 451 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 TMEM52BQ4KMG9 183 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 FAXCQ5TGI0 409 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 RBM44Q6ZP01 1051 aaKnown RBP22.32■■□□□ 1.16
HDDC3-203ENST00000494993 UMODL1-AS1Q8N2C9 162 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 KCNE4Q8WWG9 221 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 NAT6Q93015 286 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 ATXN7L3BQ96GX2 97 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 EXOC2Q96KP1 924 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 MCEEQ96PE7 176 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 CLPBQ9H078 707 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 LMBRD1Q9NUN5 540 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 ATMQ13315 3056 aa22.32■■□□□ 1.16
HDDC3-203ENST00000494993 A0A1W2PNU3 283 aaPredicted RBP22.31■■□□□ 1.16
HDDC3-203ENST00000494993 ANKRD62A6NC57 917 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 PIGNO95427 931 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 TSHRP16473 764 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 XPAP23025 273 aaPredicted RBP22.31■■□□□ 1.16
HDDC3-203ENST00000494993 UCNP55089 124 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 TMPRSS3P57727 454 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 RPL7AP62424 266 aaKnown RBP22.31■■□□□ 1.16
HDDC3-203ENST00000494993 PPARDQ03181 441 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 CYTH1Q15438 398 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 DNAAF5Q86Y56 855 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 VCPIP1Q96JH7 1222 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 AGPAT1Q99943 283 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 NCAPGQ9BPX3 1015 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 CNPY3Q9BT09 278 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 LIMA1Q9UHB6 759 aaKnown RBP22.31■■□□□ 1.16
HDDC3-203ENST00000494993 UNC13CQ8NB66 2214 aa22.31■■□□□ 1.16
HDDC3-203ENST00000494993 LGALS16A8MUM7 142 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 YY2O15391 372 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 FGF10O15520 208 aaPredicted RBP22.3■■□□□ 1.16
HDDC3-203ENST00000494993 PPP1R15BQ5SWA1 713 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 RBM43Q6ZSC3 357 aaKnown RBP22.3■■□□□ 1.16
HDDC3-203ENST00000494993 ANKRD20A12PQ8NF67 263 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 WDR48Q8TAF3 677 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 HCAR2Q8TDS4 363 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 DPH1Q9BZG8 443 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 UBA2Q9UBT2 640 aaPredicted RBP22.3■■□□□ 1.16
HDDC3-203ENST00000494993 COQ6Q9Y2Z9 468 aa22.3■■□□□ 1.16
HDDC3-203ENST00000494993 COL6A6A6NMZ7 2263 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 SCN8AQ9UQD0 1980 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 TSPAN11A1L157 253 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 CELA2BP08218 269 aaPredicted RBP22.29■■□□□ 1.16
HDDC3-203ENST00000494993 RBMS1P29558 406 aaKnown RBP22.29■■□□□ 1.16
HDDC3-203ENST00000494993 PEX5P50542 639 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 BLKP51451 505 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 GRM3Q14832 879 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 LRRC14Q15048 493 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 WSCD2Q2TBF2 565 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 ESRP1Q6NXG1 681 aaKnown RBP22.29■■□□□ 1.16
HDDC3-203ENST00000494993 PCSK4Q6UW60 755 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 CLEC17AQ6ZS10 378 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 FSTL5Q8N475 847 aaPredicted RBP22.29■■□□□ 1.16
HDDC3-203ENST00000494993 PRR11Q96HE9 360 aaPredicted RBP22.29■■□□□ 1.16
HDDC3-203ENST00000494993 SLC46A1Q96NT5 459 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 ERGIC2Q96RQ1 377 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 CCDC3Q9BQI4 270 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 SUV39H2Q9H5I1 410 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 LRRC19Q9H756 370 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 PDFQ9HBH1 243 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 CPNE5Q9HCH3 593 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 PADI4Q9UM07 663 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 PCDHGA8Q9Y5G5 932 aa22.29■■□□□ 1.16
HDDC3-203ENST00000494993 ARHGEF17Q96PE2 2063 aaPredicted RBP22.29■■□□□ 1.16
HDDC3-203ENST00000494993 CFAP46Q8IYW2 2715 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 TMEM110-MUSTN1A8MSY1 372 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 ERVH48-1M5A8F1 160 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 CASC3O15234 703 aaKnown RBP22.28■■□□□ 1.16
HDDC3-203ENST00000494993 KLK10O43240 276 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 C6P13671 934 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 HTR7P34969 479 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 HK3P52790 923 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 TPI1P60174 286 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 UBXN1Q04323 297 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 UGP2Q16851 508 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 DCUN1D2Q6PH85 259 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 PCDH12Q9NPG4 1184 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 DOLKQ9UPQ8 538 aa22.28■■□□□ 1.16
HDDC3-203ENST00000494993 DESP17661 470 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 PDX1P52945 283 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 MYL5Q02045 173 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 OGDHQ02218 1023 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 SPIDRQ14159 915 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 NFATC4Q14934 902 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ELOCQ15369 112 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ALG11Q2TAA5 492 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ARHGAP40Q5TG30 622 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ACAD10Q6JQN1 1059 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ERAP2Q6P179 960 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 HID1Q8IV36 788 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 MCOLN2Q8IZK6 566 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ARL10Q8N8L6 244 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 ZNF641Q96N77 438 aaPredicted RBP22.27■■□□□ 1.16
HDDC3-203ENST00000494993 EDEM3Q9BZQ6 932 aa22.27■■□□□ 1.16
HDDC3-203ENST00000494993 DONSONQ9NYP3 566 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms