RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 FTCDO95954 541 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 PRLRP16471 622 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 RENBPP51606 427 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 AP1S1P61966 158 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 PPIDQ08752 370 aaKnown RBP17.29■□□□□ 0.36
SNX17-209ENST00000494893 MEI1Q5TIA1 1274 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 KAZNQ674X7 775 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 AADACL2Q6P093 401 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 NEK5Q6P3R8 708 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 RCOR2Q8IZ40 523 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.29■□□□□ 0.36
SNX17-209ENST00000494893 HCAR2Q8TDS4 363 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 ZNF592Q92610 1267 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 RAB7BQ96AH8 199 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 ZNF641Q96N77 438 aaPredicted RBP17.29■□□□□ 0.36
SNX17-209ENST00000494893 NUDCD1Q96RS6 583 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 PACSIN2Q9UNF0 486 aaPredicted RBP17.29■□□□□ 0.36
SNX17-209ENST00000494893 CA5BQ9Y2D0 317 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 DNAH14Q0VDD8 3507 aa17.29■□□□□ 0.36
SNX17-209ENST00000494893 C4orf47A7E2U8 309 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 SLC30A4O14863 429 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 DDX3YO15523 660 aaKnown RBP17.28■□□□□ 0.36
SNX17-209ENST00000494893 CST8O60676 142 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 PCDH8O95206 1070 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 PRKCGP05129 697 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 MX2P20592 715 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 HSPA9P38646 679 aaKnown RBP17.28■□□□□ 0.36
SNX17-209ENST00000494893 MAPK8P45983 427 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 GRIA4P48058 902 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 AFF3P51826 1226 aaKnown RBP17.28■□□□□ 0.36
SNX17-209ENST00000494893 RACK1P63244 317 aaKnown RBP17.28■□□□□ 0.36
SNX17-209ENST00000494893 CCDC15Q0P6D6 951 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 TRAF2Q12933 501 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 ZBTB17Q13105 803 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 GRM3Q14832 879 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 PPP2R5EQ16537 467 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 TFDP3Q5H9I0 405 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 ALG1LQ6GMV1 187 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 NAPEPLDQ6IQ20 393 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 TTC7BQ86TV6 843 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 PRPF39Q86UA1 669 aaKnown RBP17.28■□□□□ 0.36
SNX17-209ENST00000494893 CCDC13Q8IYE1 715 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 CNTD1Q8N815 330 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 ARRDC2Q8TBH0 407 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 SERAC1Q96JX3 654 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 IL12RB2Q99665 862 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 TLR10Q9BXR5 811 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 MAK16Q9BXY0 300 aaKnown RBP17.28■□□□□ 0.36
SNX17-209ENST00000494893 ATP13A3Q9H7F0 1226 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 FZD3Q9NPG1 666 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 PCDHGC4Q9Y5F7 938 aa17.28■□□□□ 0.36
SNX17-209ENST00000494893 ADAMTS9Q9P2N4 1935 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 CCDC66A2RUB6 948 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 UPK3BL1B0FP48 263 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 UPK3BL2E5RIL1 263 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 KCNK1O00180 336 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 ENC1O14682 589 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 SLC31A1O15431 190 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 HTRA2O43464 458 aaPredicted RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 ATP1A1P05023 1023 aaKnown RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 HLA-DQB2P05538 268 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 CCNB1P14635 433 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 ZFXP17010 805 aaPredicted RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 SERPINA4P29622 427 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 IFI35P80217 286 aaPredicted RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 SEMG2Q02383 582 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 BCL2L1Q07817 233 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 NIPAL4Q0D2K0 466 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 TFDP2Q14188 446 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 RPS6KA1Q15418 735 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 UGP2Q16851 508 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 KIF19Q2TAC6 998 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 ODF2Q5BJF6 829 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 PAPD7Q5XG87 772 aaKnown RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 TIGD7Q6NT04 549 aaPredicted RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 MINDY1Q8N5J2 469 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 TMEM145Q8NBT3 493 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 CCNYQ8ND76 341 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 HES6Q96HZ4 224 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 RBM41Q96IZ5 413 aaKnown RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 MYOCQ99972 504 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 GTPBP2Q9BX10 602 aaKnown RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 C1QTNF2Q9BXJ5 285 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 HEMGNQ9BXL5 484 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 IL21RQ9HBE5 538 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 PCDH12Q9NPG4 1184 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 TMEM9BQ9NQ34 198 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 RBM22Q9NW64 420 aaKnown RBP eCLIP17.27■□□□□ 0.36
SNX17-209ENST00000494893 TPX2Q9ULW0 747 aaKnown RBP17.27■□□□□ 0.36
SNX17-209ENST00000494893 DMTF1Q9Y222 760 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 ANKRD6Q9Y2G4 727 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 ATP8A1Q9Y2Q0 1164 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 SNX11Q9Y5W9 270 aa17.27■□□□□ 0.36
SNX17-209ENST00000494893 CACNA1EQ15878 2313 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 SHROOM3Q8TF72 1996 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 PI4KAP42356 2102 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 IGLON5A6NGN9 336 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 RAD51BO15315 384 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 TSPAN6O43657 245 aa17.26■□□□□ 0.35
SNX17-209ENST00000494893 JCHAINP01591 159 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms