RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 ENTPD7Q9NQZ7 604 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 PACSIN3Q9UKS6 424 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 BIRC5O15392 142 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 DLX3O60479 287 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SLC2A3P11169 496 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 COL6A1P12109 1028 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 GKP32189 559 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 IDH3AP50213 366 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ABCE1P61221 599 aaKnown RBP10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SEMG2Q02383 582 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 TEX26Q8N6G2 289 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 SNX31Q8N9S9 440 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 ADAMTS19Q8TE59 1207 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 MYLIPQ8WY64 445 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 CRISPLD2Q9H0B8 497 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 VPS45Q9NRW7 570 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 YIPF1Q9Y548 306 aa10.48□□□□□ -0.73
SAMM50-206ENST00000494795 MYO15AQ9UKN7 3530 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 MAGEB16A2A368 324 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 E9PBE3 544 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 F5H5T6 163 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 KLHL41O60662 606 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 PRAMEF11O60813 436 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 DIAPH2O60879 1101 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 SERPINE1P05121 402 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 CYP4F8P98187 520 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF33AQ06730 810 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TMEM198Q66K66 360 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ANKRD33Q7Z3H0 272 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 WDR75Q8IWA0 830 aaKnown RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ARL14EPQ8N8R7 260 aaPredicted RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF461Q8TAF7 563 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 PLCD4Q9BRC7 762 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 CCDC106Q9BWC9 280 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TXLNGQ9NUQ3 528 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TMEM39AQ9NV64 488 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ZDHHC2Q9UIJ5 367 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 DNMT3LQ9UJW3 386 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 FIS1Q9Y3D6 152 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ANKRD12Q6UB98 2062 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 MYOFQ9NZM1 2061 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 LOC100653049A0A140TA62 436 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 POM121CA8CG34 1229 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TARM1B6A8C7 271 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ZBTB14O43829 449 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 KRT34O76011 436 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 HNRNPLP14866 589 aaKnown RBP eCLIP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TIAL1Q01085 375 aaKnown RBP eCLIP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 GNA12Q03113 381 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ANO4Q32M45 955 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 LSMEM2Q8N112 164 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ARHGAP18Q8N392 663 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 C2CD4AQ8NCU7 369 aaPredicted RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 RBM15BQ8NDT2 890 aaKnown RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ST13P5Q8NFI4 369 aaPredicted RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ZFRQ96KR1 1074 aaKnown RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TACO1Q9BSH4 297 aaKnown RBP10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TTLL2Q9BWV7 592 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 FAM96AQ9H5X1 160 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 COG4Q9H9E3 785 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 BPIFA1Q9NP55 256 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 KCNK4Q9NYG8 393 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 TBX21Q9UL17 535 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 ANAPC1Q9H1A4 1944 aa10.47□□□□□ -0.73
SAMM50-206ENST00000494795 CFAP73A6NFT4 308 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 LRRC14BA6NHZ5 514 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 GNRH1P01148 92 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 PAX3P23760 479 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 GRIA4P48058 902 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 THOC5Q13769 683 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 ARL13AQ5H913 290 aaPredicted RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 RABGAP1LQ5R372 815 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF549Q6P9A3 640 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 DNAJB7Q7Z6W7 309 aaPredicted RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 CNTN4Q8IWV2 1026 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 TXNDC5Q8NBS9 432 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 MDGA1Q8NFP4 955 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 PDCD6IPQ8WUM4 868 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 NSL1Q96IY1 281 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 PAWRQ96IZ0 340 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 GALPQ9UBC7 116 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 H7C4K7 107 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 PPP6CO00743 305 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 GSC2O15499 205 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 ABLIM3O94929 683 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 PRLP01236 227 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 EPHA3P29320 983 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 CA5AP35218 305 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 IKBKEQ14164 716 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 KHDC1Q4VXA5 237 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 RALGPS1Q5JS13 557 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 HECTD3Q5T447 861 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 CXorf57Q6NSI4 855 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 POTEHQ6S545 545 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 TOP1MTQ969P6 601 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 TADA1Q96BN2 335 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
SAMM50-206ENST00000494795 MRPL9Q9BYD2 267 aaKnown RBP10.46□□□□□ -0.73
SAMM50-206ENST00000494795 IGSF5Q9NSI5 407 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms