RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 JRKLQ9Y4A0 524 aa11.23□□□□□ -0.61
APTX-230ENST00000494649 DOCK9Q9BZ29 2069 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 ANKRD36A6QL64 1941 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 A0A1W2PQU0 124 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 METTL12A8MUP2 240 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 TRAFD1O14545 582 aaPredicted RBP11.22□□□□□ -0.61
APTX-230ENST00000494649 WNT9AO14904 365 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 SLC31A1O15431 190 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 SPINT1O43278 529 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 RNGTTO60942 597 aaKnown RBP11.22□□□□□ -0.61
APTX-230ENST00000494649 CFIP05156 583 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 ALPIP09923 528 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 TIMP2P16035 220 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 NFKB1P19838 968 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 MPLP40238 635 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 GDF10P55107 478 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 AP1S1P61966 158 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 IFI35P80217 286 aaPredicted RBP11.22□□□□□ -0.61
APTX-230ENST00000494649 SF3A2Q15428 464 aaKnown RBP11.22□□□□□ -0.61
APTX-230ENST00000494649 UGP2Q16851 508 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 TEX44Q53QW1 395 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 SYCP2LQ5T4T6 812 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 DENND2CQ68D51 928 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 KIAA0895LQ68EN5 471 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 LAIR1Q6GTX8 287 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 ZNF567Q8N184 647 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 OR2T34Q8NGX1 318 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 CCDC110Q8TBZ0 833 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 LRIG1Q96JA1 1093 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 HDAC8Q9BY41 377 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 CARD9Q9H257 536 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 EFR3BQ9Y2G0 817 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 COQ6Q9Y2Z9 468 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 RAI2Q9Y5P3 530 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 FADS3Q9Y5Q0 445 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 SPEGQ15772 3267 aa11.22□□□□□ -0.61
APTX-230ENST00000494649 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
APTX-230ENST00000494649 DMXL1Q9Y485 3027 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 OTOGLQ3ZCN5 2332 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 PROB1E7EW31 1015 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 FANCGO15287 622 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 MMP20O60882 483 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 PMPCBO75439 489 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 MMP2P08253 660 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 CD68P34810 354 aaPredicted RBP11.21□□□□□ -0.61
APTX-230ENST00000494649 HSPA9P38646 679 aaKnown RBP11.21□□□□□ -0.61
APTX-230ENST00000494649 GALNT3Q14435 633 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 LONRF2Q1L5Z9 754 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 FAM71DQ8N9W8 422 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 PARD6AQ9NPB6 346 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 PCDH12Q9NPG4 1184 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 ZFR2Q9UPR6 939 aaKnown RBP11.21□□□□□ -0.61
APTX-230ENST00000494649 ATP8A1Q9Y2Q0 1164 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 PLXND1Q9Y4D7 1925 aa11.21□□□□□ -0.61
APTX-230ENST00000494649 BCLAF3A2AJT9 711 aaKnown RBP11.21□□□□□ -0.62
APTX-230ENST00000494649 IGLON5A6NGN9 336 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 PAK4O96013 591 aaPredicted RBP11.21□□□□□ -0.62
APTX-230ENST00000494649 CSNK1DP48730 415 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 SFSWAPQ12872 951 aaKnown RBP11.21□□□□□ -0.62
APTX-230ENST00000494649 OLIG2Q13516 323 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 C11orf74Q86VG3 221 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 LPCAT1Q8NF37 534 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 RUBCNQ92622 972 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 FOXJ1Q92949 421 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 TEKT5Q96M29 485 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 ZNF641Q96N77 438 aaPredicted RBP11.21□□□□□ -0.62
APTX-230ENST00000494649 SLC6A18Q96N87 628 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 AP1M1Q9BXS5 423 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 RXFP3Q9NSD7 469 aa11.21□□□□□ -0.62
APTX-230ENST00000494649 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 H0Y8X5 98 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 EPN2O95208 641 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 CPP00450 1065 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SLC4A1P02730 911 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 RETP07949 1114 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SERPINF2P08697 491 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 PIRTP0C851 137 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 C7P10643 843 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 TERF1P54274 439 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 SKOR1P84550 965 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 FGL2Q14314 439 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 ARMC12Q5T9G4 340 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 FAXCQ5TGI0 409 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 PRPF39Q86UA1 669 aaKnown RBP11.2□□□□□ -0.62
APTX-230ENST00000494649 CDKL3Q8IVW4 592 aaPredicted RBP11.2□□□□□ -0.62
APTX-230ENST00000494649 KIAA2013Q8IYS2 634 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 CADM4Q8NFZ8 388 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 OR2I1PQ8NGU4 316 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 FAM131CQ96AQ9 280 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 CAPZA3Q96KX2 299 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 OSBPL9Q96SU4 736 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 GLOD4Q9HC38 313 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 AASDHPPTQ9NRN7 309 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 RSPH14Q9UHP6 348 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 PILRBQ9UKJ0 227 aa11.2□□□□□ -0.62
APTX-230ENST00000494649 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms