RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 INO80CQ6PI98 192 aaPredicted RBP4.64□□□□□ -1.67
SMC4-224ENST00000494612 CPLX2Q6PUV4 134 aaKnown RBP4.64□□□□□ -1.67
SMC4-224ENST00000494612 PXKQ7Z7A4 578 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 NOXA1Q86UR1 476 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 CAMK1DQ8IU85 385 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 ETNPPLQ8TBG4 499 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 INPP5DQ92835 1189 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 RNF183Q96D59 192 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 LYZL4Q96KX0 146 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 WDFY2Q96P53 400 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 WDR77Q9BQA1 342 aaPredicted RBP4.64□□□□□ -1.67
SMC4-224ENST00000494612 SDF4Q9BRK5 362 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 TRMOQ9BU70 441 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 NPFFR1Q9GZQ6 430 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 RNF146Q9NTX7 359 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 DECR2Q9NUI1 292 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 A4GNTQ9UNA3 340 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 FAM96BQ9Y3D0 163 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 CAPN7Q9Y6W3 813 aa4.64□□□□□ -1.67
SMC4-224ENST00000494612 FAM237BA0A1B0GVD1 139 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 A0A1W2PQM1 296 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 EIF3CLB5ME19 914 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 BCAT2O15382 392 aaPredicted RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 LIASO43766 372 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 DOK2O60496 412 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 HNRNPCL1O60812 293 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 CLEC3BP05452 202 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 HEXAP06865 529 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 ITGAXP20702 1163 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 SCP2P22307 547 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 CHMP24386 653 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 CPOXP36551 454 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 CXCR3P49682 368 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 EIF3BP55884 814 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 HDAC4P56524 1084 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 CEBPZQ03701 1054 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 ITGADQ13349 1161 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 PTGR1Q14914 329 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 GSTA3Q16772 222 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 PRTGQ2VWP7 1150 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 HIST2H2BCQ6DN03 193 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 HIST2H2BDQ6DRA6 164 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 FBXO46Q6PJ61 603 aaPredicted RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 TMC8Q8IU68 726 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 ZCCHC9Q8N567 271 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 NGEFQ8N5V2 710 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 ENGASEQ8NFI3 743 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 GJC3Q8NFK1 279 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 GPT2Q8TD30 523 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 TMEM170AQ8WVE7 144 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 SMARCE1Q969G3 411 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 INTS12Q96CB8 462 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 GFM1Q96RP9 751 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 ITPAQ9BY32 194 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 ISCUQ9H1K1 167 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 KIF9Q9HAQ2 790 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 EIF2B3Q9NR50 452 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 INTS6Q9UL03 887 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 CORO1CQ9ULV4 474 aaPredicted RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 LSM4Q9Y4Z0 139 aaKnown RBP4.63□□□□□ -1.67
SMC4-224ENST00000494612 KCNE2Q9Y6J6 123 aa4.63□□□□□ -1.67
SMC4-224ENST00000494612 ERCC6Q03468 1493 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 FSD2A1L4K1 749 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 DYTNA2CJ06 578 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 LRRC53A6NM62 1247 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 NPIPB11E5RHQ5 1161 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 AP3D1O14617 1153 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ZBED4O75132 1171 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 GFPT2O94808 682 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 EPN2O95208 641 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 SYF2O95926 243 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 TOMM40O96008 361 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 RARGP13631 454 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 KRT10P13645 584 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ENO3P13929 434 aaPredicted RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 IL7RP16871 459 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ZNF8P17098 575 aaPredicted RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 CHRNB2P17787 502 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 SRD5A1P18405 259 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 TTKP33981 857 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 RYKP34925 604 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ARL3P36405 182 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 GPR12P47775 334 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ALDH7A1P49419 539 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 PMS2P54278 862 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 P2RX3P56373 397 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 LPIN1Q14693 890 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 RNPS1Q15287 305 aaKnown RBP4.62□□□□□ -1.67
SMC4-224ENST00000494612 TTI2Q6NXR4 508 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 TSSK4Q6SA08 328 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 COLCA1Q6ZS62 124 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 Q6ZTK2 550 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 IKBIPQ70UQ0 350 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 PALB2Q86YC2 1186 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 MMP21Q8N119 569 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 PARP16Q8N5Y8 322 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 ARFGAP1Q8N6T3 406 aa4.62□□□□□ -1.67
SMC4-224ENST00000494612 GTF3C6Q969F1 213 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms