RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 ZDHHC6Q9H6R6 413 aa6.89□□□□□ -1.31
FN1-225ENST00000494446 SLC39A2Q9NP94 309 aa6.89□□□□□ -1.31
FN1-225ENST00000494446 MRPL40Q9NQ50 206 aaKnown RBP6.89□□□□□ -1.31
FN1-225ENST00000494446 RCOR3Q9P2K3 495 aaPredicted RBP6.89□□□□□ -1.31
FN1-225ENST00000494446 KLQ9UEF7 1012 aa6.89□□□□□ -1.31
FN1-225ENST00000494446 SLC12A6Q9UHW9 1150 aa6.89□□□□□ -1.31
FN1-225ENST00000494446 FBXO2Q9UK22 296 aaPredicted RBP6.89□□□□□ -1.31
FN1-225ENST00000494446 RPS6KL1Q9Y6S9 549 aa6.89□□□□□ -1.31
FN1-225ENST00000494446 C16orf96A6NNT2 1141 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TMEM110-MUSTN1A8MSY1 372 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 A8MU76 341 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 KCNU1A8MYU2 1149 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 B4E171 279 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 PRSS44E7EML9 344 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 K7ELQ4 463 aaPredicted RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 TOR1BO14657 336 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 ZW10O43264 779 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TM7SF2O76062 418 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 CBX6O95503 412 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 FYNP06241 537 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TRIM49P0CI25 452 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TRIM49CP0CI26 452 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 SETSIPP0DME0 302 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 HOXB4P17483 251 aaPredicted RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 VARSP26640 1264 aaKnown RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 DLSTP36957 453 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TSPAN7P41732 249 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 PEX5P50542 639 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 MAZP56270 477 aaKnown RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 ELOAQ14241 798 aaKnown RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 IRF4Q15306 451 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 KLHL40Q2TBA0 621 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 ZRANB3Q5FWF4 1079 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 LRRC73Q5JTD7 316 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 SNAP47Q5SQN1 464 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 KCTD16Q68DU8 428 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 JMJD6Q6NYC1 403 aaPredicted RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 FBXL22Q6P050 247 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 PMF1Q6P1K2 205 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 CEACAM20Q6UY09 585 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 XYLT1Q86Y38 959 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TP53I13Q8NBR0 393 aaPredicted RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 OR4D9Q8NGE8 314 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 GOLGA5Q8TBA6 731 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 FAM149B1Q96BN6 582 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 PDXPQ96GD0 296 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 RBM15Q96T37 977 aaKnown RBP eCLIP6.88□□□□□ -1.31
FN1-225ENST00000494446 PSMB7Q99436 277 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 PRMT1Q99873 361 aaKnown RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 HEPHQ9BQS7 1158 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 C2orf49Q9BVC5 232 aaPredicted RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TWSG1Q9GZX9 223 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TNMDQ9H2S6 317 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 TMEM9Q9P0T7 183 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 VPS51Q9UID3 782 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 VANGL2Q9ULK5 521 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 SRPRBQ9Y5M8 271 aaKnown RBP6.88□□□□□ -1.31
FN1-225ENST00000494446 CLIC4Q9Y696 253 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 RTTNQ86VV8 2226 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 PIKFYVEQ9Y2I7 2098 aa6.88□□□□□ -1.31
FN1-225ENST00000494446 SYNJ2BP-COX16A0A087WUM0 186 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 PIPSLA2A3N6 862 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 HEATR9A2RTY3 570 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 ANKUB1A6NFN9 424 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 LRCH4O75427 683 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 RHOCP08134 193 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 THRAP10827 490 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 GKP32189 559 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 MAN1A1P33908 653 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 GGCXP38435 758 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 CCL11P51671 97 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 VAMP7P51809 220 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 CCNHP51946 323 aaPredicted RBP6.87□□□□□ -1.31
FN1-225ENST00000494446 RNASE9P60153 205 aaKnown RBP6.87□□□□□ -1.31
FN1-225ENST00000494446 AMPD3Q01432 767 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 MC2RQ01718 297 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 DNM1Q05193 864 aaKnown RBP6.87□□□□□ -1.31
FN1-225ENST00000494446 PPP3CAQ08209 521 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 DPYDQ12882 1025 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 SEMA5AQ13591 1074 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 NFATC4Q14934 902 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 CLPPQ16740 277 aaPredicted RBP6.87□□□□□ -1.31
FN1-225ENST00000494446 CARD16Q5EG05 197 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 FOXR2Q6PJQ5 311 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 GDF7Q7Z4P5 450 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 ZNF438Q7Z4V0 828 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 IRF2BP1Q8IU81 584 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 APLFQ8IW19 511 aaPredicted RBP6.87□□□□□ -1.31
FN1-225ENST00000494446 RYBPQ8N488 228 aaPredicted RBP6.87□□□□□ -1.31
FN1-225ENST00000494446 ESX1Q8N693 406 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 BMPERQ8N8U9 685 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 Q8NA96 180 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 ATL2Q8NHH9 583 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 CCL4L1Q8NHW4 92 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 KIAA1524Q8TCG1 905 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 CXorf40AQ8TE69 158 aa6.87□□□□□ -1.31
FN1-225ENST00000494446 NANOS1Q8WY41 292 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms