RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 PILRBQ9UKJ0 227 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 PCDHGC4Q9Y5F7 938 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 FADS3Q9Y5Q0 445 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 RALGAPA1Q6GYQ0 2036 aa12.58□□□□□ -0.4
TRA2A-209ENST00000494255 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
TRA2A-209ENST00000494255 TCRBV7S2A1N4TA0A589 114 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 TRAFD1O14545 582 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 HTRA2O43464 458 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CEP104O60308 925 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CPP00450 1065 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CD27P26842 260 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 MAOBP27338 520 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 RBL1P28749 1068 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 NUDT1P36639 197 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CD86P42081 329 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 PPP2CBP62714 309 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 PPP2CAP67775 309 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 SPEM2Q0P670 501 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 UGP2Q16851 508 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 LRRC73Q5JTD7 316 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 KIAA1161Q6NSJ0 714 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 PID1Q7Z2X4 250 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 ADAT2Q7Z6V5 191 aaKnown RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 HORMAD1Q86X24 394 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 NDUFAF2Q8N183 169 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 ARRDC2Q8TBH0 407 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 PBKQ96KB5 322 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 TEKT5Q96M29 485 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 FRMD8P1Q9BZ68 369 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 GLOD4Q9HC38 313 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 VPS45Q9NRW7 570 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 TRHDEQ9UKU6 1024 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 PCDHB9Q9Y5E1 797 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 RAI2Q9Y5P3 530 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 A0A1W2PQU0 124 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 AREL1O15033 823 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 KCNN4O15554 427 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 IGHV4-34P06331 123 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 MAT2AP31153 395 aaKnown RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CXCR5P32302 372 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 EPHB1P54762 984 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 GNG11P61952 73 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 RPS21P63220 83 aaKnown RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 NIPAL4Q0D2K0 466 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 WASHC5Q12768 1159 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 TRAF2Q12933 501 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 DUOXA1Q1HG43 343 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 SETMARQ53H47 684 aaPredicted RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CEP76Q8TAP6 659 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 CXorf40AQ8TE69 158 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 NSMCE3Q96MG7 304 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 SLC25A51Q9H1U9 297 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 C10orf88Q9H8K7 445 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 PCDH12Q9NPG4 1184 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 ITM2BQ9Y287 266 aa12.57□□□□□ -0.4
TRA2A-209ENST00000494255 R3HDM2Q9Y2K5 976 aaKnown RBP12.57□□□□□ -0.4
TRA2A-209ENST00000494255 A0A1B0GTW7 788 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 A0A1W2PPC4 97 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 PRR5-ARHGAP8B1AHC4 643 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 BCAT2O15382 392 aaPredicted RBP12.56□□□□□ -0.4
TRA2A-209ENST00000494255 LATO43561 262 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 PGLSO95336 258 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 FGGP02679 453 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 CFIP05156 583 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 FAM193AP78312 1265 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 SGCGQ13326 291 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 CCDC6Q16204 474 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 LONRF2Q1L5Z9 754 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 PLA2G2CQ5R387 149 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 PEAR1Q5VY43 1037 aaPredicted RBP12.56□□□□□ -0.4
TRA2A-209ENST00000494255 ITPRIPL1Q6GPH6 555 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 ZSWIM9Q86XI8 627 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 ZNF567Q8N184 647 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 ZCCHC9Q8N567 271 aaKnown RBP12.56□□□□□ -0.4
TRA2A-209ENST00000494255 DCLK2Q8N568 766 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 GPR161Q8N6U8 529 aaKnown RBP12.56□□□□□ -0.4
TRA2A-209ENST00000494255 IMP4Q96G21 291 aaKnown RBP12.56□□□□□ -0.4
TRA2A-209ENST00000494255 RBM15Q96T37 977 aaKnown RBP eCLIP12.56□□□□□ -0.42e-7■■■■□ 22
TRA2A-209ENST00000494255 NUSAP1Q9BXS6 441 aaKnown RBP12.56□□□□□ -0.4
TRA2A-209ENST00000494255 SEMA4GQ9NTN9 838 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 TMEM74BQ9NUR3 256 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 RSPH14Q9UHP6 348 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 PHTF1Q9UMS5 762 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 DMTF1Q9Y222 760 aa12.56□□□□□ -0.4
TRA2A-209ENST00000494255 CFAP69A5D8W1 941 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 RIOK3O14730 519 aaKnown RBP12.55□□□□□ -0.4
TRA2A-209ENST00000494255 KHNYNO15037 678 aaKnown RBP12.55□□□□□ -0.4
TRA2A-209ENST00000494255 FOXD2O60548 495 aaPredicted RBP12.55□□□□□ -0.4
TRA2A-209ENST00000494255 ATP1A1P05023 1023 aaKnown RBP12.55□□□□□ -0.4
TRA2A-209ENST00000494255 PRKCGP05129 697 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 ZNF806P0C7X5 589 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 NFKB1P19838 968 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 TNNT3P45378 269 aaPredicted RBP12.55□□□□□ -0.4
TRA2A-209ENST00000494255 SKOR1P84550 965 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 TEAD4Q15561 434 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 SLC14A2Q15849 920 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 CSRP2Q16527 193 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
TRA2A-209ENST00000494255 TMEM52BQ4KMG9 183 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms