RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 BEX3Q00994 111 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 FOLH1Q04609 750 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 BNIP2Q12982 314 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 ZBTB17Q13105 803 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 USP4Q13107 963 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 MAP7D1Q3KQU3 841 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 CERCAMQ5T4B2 595 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 RNF220Q5VTB9 566 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 CXCL17Q6UXB2 119 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 PLD6Q8N2A8 252 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 PHTF2Q8N3S3 785 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 DNAJB3Q8WWF6 145 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 AGAP2Q99490 1192 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 SMOQ99835 787 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 GORASP1Q9BQQ3 440 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 TRIM56Q9BRZ2 755 aaKnown RBP11.58□□□□□ -0.56
RFC4-214ENST00000494047 TIMMDC1Q9NPL8 285 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 CRTAC1Q9NQ79 661 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 CHRAC1Q9NRG0 131 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 TREX1Q9NSU2 369 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 TMEM39AQ9NV64 488 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 COX16Q9P0S2 106 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 VPS9D1Q9Y2B5 631 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 INPP5FQ9Y2H2 1132 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 MFHAS1Q9Y4C4 1052 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 HES2Q9Y543 173 aa11.58□□□□□ -0.56
RFC4-214ENST00000494047 LOC100653049A0A140TA62 436 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 TK2O00142 265 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 PTGESO14684 152 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 PFDN6O15212 129 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 PQBP1O60828 265 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 KRT34O76011 436 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 PDE5AO76074 875 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 FAM58BPP0C7Q3 252 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 MPSTP25325 297 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 ADRA1AP35348 466 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 MRPL19P49406 292 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 NR1H2P55055 460 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 POLE2P56282 527 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 TUBA4AP68366 448 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 PURAQ00577 322 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 PFKPQ01813 784 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 SOX4Q06945 474 aaPredicted RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 GRIK2Q13002 908 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 ITGA7Q13683 1181 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 TRIM25Q14258 630 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 TCHHL1Q5QJ38 904 aaPredicted RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 MANEALQ5VSG8 457 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 BTBD8Q5XKL5 378 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 NXNQ6DKJ4 435 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 FAM171BQ6P995 826 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 UGT2A3Q6UWM9 527 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 NAPRTQ6XQN6 538 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 TICAM1Q8IUC6 712 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 TDHQ8IZJ6 230 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 CENPLQ8N0S6 344 aaPredicted RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 PELI3Q8N2H9 469 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 SLC25A41Q8N5S1 370 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 NPWQ8N729 165 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 RTL3Q8N8U3 475 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 TERB1Q8NA31 727 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 DQX1Q8TE96 717 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 NAT14Q8WUY8 206 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 L3HYPDHQ96EM0 354 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 OR52B2Q96RD2 323 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 CDRT15Q96T59 188 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 HOPXQ9BPY8 73 aaPredicted RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 MTG1Q9BT17 334 aaPredicted RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 PRDM5Q9NQX1 630 aaPredicted RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 OLA1Q9NTK5 396 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 FAM105AQ9NUU6 356 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 CIDEBQ9UHD4 219 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 RIMS3Q9UJD0 308 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 PTBP2Q9UKA9 531 aaKnown RBP11.57□□□□□ -0.56
RFC4-214ENST00000494047 ADAMTS6Q9UKP5 1117 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 FBXO5Q9UKT4 447 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 SCN10AQ9Y5Y9 1956 aa11.57□□□□□ -0.56
RFC4-214ENST00000494047 GRXCR2A6NFK2 248 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.56□□□□□ -0.56
RFC4-214ENST00000494047 HHLA1C9JL84 531 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 TXNDC9O14530 226 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 NRP1O14786 923 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 UBDO15205 165 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 GRID2O43424 1007 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 RNASEH1O60930 286 aaKnown RBP11.56□□□□□ -0.56
RFC4-214ENST00000494047 ZNF623O75123 536 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 GPC4O75487 556 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 SRP72O76094 671 aaKnown RBP11.56□□□□□ -0.56
RFC4-214ENST00000494047 VAPBO95292 243 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 AHSGP02765 367 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 USP17L7P0C7H9 530 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 PCSK2P16519 638 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 PSMC3P17980 439 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 NMBRP28336 390 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 TTKP33981 857 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 ARCN1P48444 511 aaKnown RBP11.56□□□□□ -0.56
RFC4-214ENST00000494047 TUBP50607 506 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 SCNN1GP51170 649 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 RHDQ02161 417 aa11.56□□□□□ -0.56
RFC4-214ENST00000494047 EIF4EBP2Q13542 120 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms