RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 PRDM16Q9HAZ2 1276 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 ABCB9Q9NP78 766 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 PHF24Q9UPV7 400 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 ATP10AO60312 1499 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 COL15A1P39059 1388 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 PRAMEF33A0A0G2JMD5 474 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 FAM205CA6NFA0 338 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 KPNA3O00505 521 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-221ENST00000493795 PRAMEF10O60809 474 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 CAMTA2O94983 1202 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 CYP17A1P05093 508 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 FAM228BP0C875 321 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 MMP13P45452 471 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 MBTD1Q05BQ5 628 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 RABL6Q3YEC7 729 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-221ENST00000493795 SLC9A4Q6AI14 798 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 ANO7Q6IWH7 933 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 CXorf57Q6NSI4 855 aaKnown RBP7.91□□□□□ -1.14
BRCA1-221ENST00000493795 RASAL3Q86YV0 1011 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 TMC8Q8IU68 726 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 PDPRQ8NCN5 879 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 CEP41Q9BYV8 373 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 MOV10Q9HCE1 1003 aaKnown RBP7.91□□□□□ -1.14
BRCA1-221ENST00000493795 DDX43Q9NXZ2 648 aaKnown RBP7.91□□□□□ -1.14
BRCA1-221ENST00000493795 KANSL3Q9P2N6 904 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 TRPS1Q9UHF7 1281 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 ADAM28Q9UKQ2 775 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 PLAGL2Q9UPG8 496 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 METP08581 1390 aa7.91□□□□□ -1.14
BRCA1-221ENST00000493795 OR2AT4A6NND4 320 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 L7N2F9 121 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 QSOX1O00391 747 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 MID1O15344 667 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 XYLBO75191 536 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CCNDBP1O95273 360 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 FAM153BP0C7A2 387 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ADRA2BP18089 450 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ZNF135P52742 658 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 VAMP2P63027 116 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 HLFQ16534 295 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PPM1LQ5SGD2 360 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 NYAP1Q6ZVC0 841 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 APTXQ7Z2E3 356 aaKnown RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 C10orf107Q8IVU9 208 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ZZZ3Q8IYH5 903 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ARMC10Q8N2F6 343 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 OR52K2Q8NGK3 314 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 DNAJB14Q8TBM8 379 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SUSD6Q92537 303 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 LENG9Q96B70 501 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 MARK4Q96L34 752 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 MBOAT7Q96N66 472 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 COPS4Q9BT78 406 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SPATA9Q9BWV2 254 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 POLR1EQ9GZS1 481 aaKnown RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SEMA4AQ9H3S1 761 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 DNAJC11Q9NVH1 559 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CLIC5Q9NZA1 410 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CDH7Q9ULB5 785 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SNCAIPQ9Y6H5 919 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ENTPD3O75355 529 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CYP4B1P13584 511 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PECAM1P16284 738 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SLC6A2P23975 617 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 GPD2P43304 727 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 TSPAN5P62079 268 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 RPL38P63173 70 aaKnown RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CYP4F8P98187 520 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 FOLH1Q04609 750 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SCN1BQ07699 218 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PEX6Q13608 980 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 DPYSQ14117 519 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 AP5B1Q2VPB7 878 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 GXYLT1Q4G148 440 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 FAM92BQ6ZTR7 304 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SLITRK4Q8IW52 837 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ING5Q8WYH8 240 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 SMARCD1Q96GM5 515 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CPB2Q96IY4 423 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 OMDQ99983 421 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 C3orf14Q9HBI5 128 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CISHQ9NSE2 258 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 HPF1Q9NWY4 346 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 TRNAU1APQ9NX07 287 aaKnown RBP7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PCDHGC5Q9Y5F6 944 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CCL15-CCL14A0A0B4J2E2 113 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 MOXD2PA6NHM9 499 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 AXIN1O15169 862 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 OR1I1O60431 355 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PEX11AO75192 247 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 FTH1P02794 183 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ALDH2P05091 517 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 PGRP06401 933 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 FSHRP23945 695 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ITPKBP27987 946 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ARPC4P59998 168 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ERVK-24P63145 666 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 RHEBQ15382 184 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 CCL15Q16663 113 aa7.9□□□□□ -1.14
BRCA1-221ENST00000493795 ABCA11PQ4W5N1 156 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms