RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SLC16A5O15375 505 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 SLC25A17O43808 307 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 KLK8O60259 260 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 SERPINI2O75830 405 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 VNN2O95498 520 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 PRR23D2P0DMB1 279 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-216ENST00000493758 CLDN2P57739 230 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 CAPSQ13938 189 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 CAMK1Q14012 370 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 TXNDC8Q6A555 127 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 MOB3CQ70IA8 216 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 TADA2BQ86TJ2 420 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 ZNF354CQ86Y25 554 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 SMAP1Q8IYB5 467 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-216ENST00000493758 TCP11L2Q8N4U5 519 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 TXNDC15Q96J42 360 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 FIZ1Q96SL8 496 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 SLC32A1Q9H598 525 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 CYSLTR2Q9NS75 346 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 IL1RAPL1Q9NZN1 696 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 OR6C3Q9NZP0 311 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 PEMTQ9UBM1 199 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 HSPB7Q9UBY9 170 aa4.42□□□□□ -1.7
ITGB1-216ENST00000493758 A0A1W2PQM1 296 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 LINC01553A4QN01 128 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 RRN3P2A6NIE6 340 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 SRRM3A6NNA2 597 aaPredicted RBP4.41□□□□□ -1.7
ITGB1-216ENST00000493758 BTBD18B2RXH4 712 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 CH25HO95992 272 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 URODP06132 367 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 HOXB5P09067 269 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 HNRNPA1P09651 372 aaKnown RBP eCLIP4.41□□□□□ -1.7
ITGB1-216ENST00000493758 IGHV4-30-4P0DP06 118 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 SLC2A4P14672 509 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 GABRB2P47870 512 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 EFNA5P52803 228 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 RAD23BP54727 409 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 GAS1P54826 345 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 KRTAP10-9P60411 292 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 TUBA1BP68363 451 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 NFATC4Q14934 902 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 C16orf82Q7Z2V1 217 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 FJX1Q86VR8 437 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 RBMXL3Q8N7X1 1067 aaKnown RBP4.41□□□□□ -1.7
ITGB1-216ENST00000493758 GJC3Q8NFK1 279 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 HTRA1Q92743 480 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 ZBTB10Q96DT7 871 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 RTP4Q96DX8 246 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 DDX31Q9H8H2 851 aaKnown RBP4.41□□□□□ -1.7
ITGB1-216ENST00000493758 SMYD2Q9NRG4 433 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 C20orf141Q9NUB4 165 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 GGA3Q9NZ52 723 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 MPP6Q9NZW5 540 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 PAM16Q9Y3D7 125 aa4.41□□□□□ -1.7
ITGB1-216ENST00000493758 IGLV5-37A0A075B6J1 123 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 PRSS44E7EML9 344 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 J3KR12 359 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 TFPIP10646 304 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 AGAP20933 346 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 ITGB8P26012 769 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 POU1F1P28069 291 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 RPL3P39023 403 aaKnown RBP4.4□□□□□ -1.71
ITGB1-216ENST00000493758 PPM1FP49593 454 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-216ENST00000493758 CDH15P55291 814 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 POU5F1BQ06416 359 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 GPR68Q15743 365 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 NFIL3Q16649 462 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 SOWAHAQ2M3V2 549 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 SETMARQ53H47 684 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-216ENST00000493758 INO80CQ6PI98 192 aaPredicted RBP4.4□□□□□ -1.71
ITGB1-216ENST00000493758 RRM2BQ7LG56 351 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 ZNF114Q8NC26 417 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 ARRDC2Q8TBH0 407 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 WASF1Q92558 559 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 FBXL8Q96CD0 374 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 TBATAQ96M53 351 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 MXRA8Q9BRK3 442 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 ZNF556Q9HAH1 456 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 BRF2Q9HAW0 419 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 NFE2L3Q9Y4A8 694 aa4.4□□□□□ -1.71
ITGB1-216ENST00000493758 A0A1B0GVC2 190 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 PAPSS2O95340 614 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-216ENST00000493758 POLBP06746 335 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 GALTP07902 379 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 GALNT2Q10471 571 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 ILF3Q12906 894 aaKnown RBP eCLIP4.39□□□□□ -1.71
ITGB1-216ENST00000493758 PTP4A2Q12974 167 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 RUNX2Q13950 521 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 RNPS1Q15287 305 aaKnown RBP4.39□□□□□ -1.71
ITGB1-216ENST00000493758 TAF11Q15544 211 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
ITGB1-216ENST00000493758 PRAMEF19Q5SWL8 479 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 SHFQ7M4L6 423 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 PARP16Q8N5Y8 322 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 IL17REQ8NFR9 667 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 PPM1EQ8WY54 764 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 GAREM1Q9H706 876 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 BABAM1Q9NWV8 329 aa4.39□□□□□ -1.71
ITGB1-216ENST00000493758 TYW5A2RUC4 315 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms