RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 MATN3O15232 486 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 TJP3O95049 919 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 PIGNO95427 931 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 SEMA4FO95754 770 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 APOC2P02655 101 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 HLA-DQB2P05538 268 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 SYPP08247 313 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 C7P10643 843 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 ITGB7P26010 798 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MSNP26038 577 aaKnown RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 ACSL1P33121 698 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 DRD3P35462 400 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 SCNN1BP51168 640 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MAXP61244 160 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 OTUD4Q01804 1114 aaKnown RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 ITKQ08881 620 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 ZNF423Q2M1K9 1284 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 ZNF569Q5MCW4 686 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 CFAP58Q5T655 872 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 B4GALNT4Q76KP1 1039 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 PARS2Q7L3T8 475 aaKnown RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 ZC3H18Q86VM9 953 aaKnown RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 SLC35F6Q8N357 371 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MINDY1Q8N5J2 469 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.72□□□□□ -0.53
CTSA-209ENST00000493522 ACTL9Q8TC94 416 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 TFB1MQ8WVM0 346 aaKnown RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 UBE2Q2Q8WVN8 375 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MAML1Q92585 1016 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 LRIG1Q96JA1 1093 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 KLHL32Q96NJ5 620 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 QKIQ96PU8 341 aaKnown RBP eCLIP11.72□□□□□ -0.53
CTSA-209ENST00000493522 OSBPL1AQ9BXW6 950 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 CEP41Q9BYV8 373 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 BTBD1Q9H0C5 482 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 BRD8Q9H0E9 1235 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 SGK2Q9HBY8 427 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 CAPN10Q9HC96 672 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 SCUBE2Q9NQ36 999 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 FSCN3Q9NQT6 498 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 WSB2Q9NYS7 404 aaPredicted RBP11.72□□□□□ -0.53
CTSA-209ENST00000493522 EFR3BQ9Y2G0 817 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MYLKQ15746 1914 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 ITPR1Q14643 2758 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 TTC24A2A3L6 582 aaPredicted RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 H7C0C1 242 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 RNF103O00237 685 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ARHGAP33O14559 1287 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 GJB3O75712 270 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 CCNB1P14635 433 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 SERPINA4P29622 427 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ATP5OP48047 213 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 CSNK1DP48730 415 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 NEK3P51956 506 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ADPRHP54922 357 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 AP1S1P61966 158 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 IFI35P80217 286 aaPredicted RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 ZBTB17Q13105 803 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 GRM3Q14832 879 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 PRKD1Q15139 912 aaPredicted RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 NOMO1Q15155 1222 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ZNF805Q5CZA5 627 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 PIP5KL1Q5T9C9 394 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 AGBL4Q5VU57 503 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 GDPD4Q6W3E5 623 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ERN2Q76MJ5 926 aaKnown RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 CDKL3Q8IVW4 592 aaPredicted RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 PGBD5Q8N414 524 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 OR14C36Q8NHC7 312 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 SNX19Q92543 992 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 FATE1Q969F0 183 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ZNF419Q96HQ0 510 aaPredicted RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 HSPA12BQ96MM6 686 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 FAM118BQ9BPY3 351 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 MGME1Q9BQP7 344 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 TLR10Q9BXR5 811 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 POLR1EQ9GZS1 481 aaKnown RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 CARD9Q9H257 536 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 NEUROG2Q9H2A3 272 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 ATP13A3Q9H7F0 1226 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 RBM22Q9NW64 420 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTSA-209ENST00000493522 SUSD2Q9UGT4 822 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 LHX6Q9UPM6 363 aa11.71□□□□□ -0.53
CTSA-209ENST00000493522 FASNP49327 2511 aaKnown RBP11.71□□□□□ -0.53
CTSA-209ENST00000493522 PCNX2A6NKB5 2137 aa11.71□□□□□ -0.54
CTSA-209ENST00000493522 SCN8AQ9UQD0 1980 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 FAM221BA6H8Z2 402 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 LRRC72A6NJI9 287 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 ENC1O14682 589 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 SLC7A4O43246 635 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 JCHAINP01591 159 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 ADRB3P13945 408 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 GNSP15586 552 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 XPAP23025 273 aaPredicted RBP11.7□□□□□ -0.54
CTSA-209ENST00000493522 EIF3EP60228 445 aaKnown RBP11.7□□□□□ -0.54
CTSA-209ENST00000493522 BCL2L1Q07817 233 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 CCDC15Q0P6D6 951 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 SLC14A1Q13336 389 aa11.7□□□□□ -0.54
CTSA-209ENST00000493522 SLC45A4Q5BKX6 768 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms