RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 ARHGEF7Q14155 803 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 STAT4Q14765 748 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 NOMO1Q15155 1222 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 TAZQ16635 292 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 DUOXA1Q1HG43 343 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 LONRF2Q1L5Z9 754 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 TEX44Q53QW1 395 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 AGBL4Q5VU57 503 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 USP45Q70EL2 814 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 PARS2Q7L3T8 475 aaKnown RBP8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 PID1Q7Z2X4 250 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 CAMK1DQ8IU85 385 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 TEX26Q8N6G2 289 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 SUMF1Q8NBK3 374 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 ACTL9Q8TC94 416 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 MAML1Q92585 1016 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 ALG3Q92685 438 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 RMDN1Q96DB5 314 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 ZNF419Q96HQ0 510 aaPredicted RBP8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 PBKQ96KB5 322 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 AGAP3Q96P47 875 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 OLFM3Q96PB7 478 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 QKIQ96PU8 341 aaKnown RBP eCLIP8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 ADGRE3Q9BY15 652 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 NOD2Q9HC29 1040 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 CD93Q9NPY3 652 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 HOMER3Q9NSC5 361 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 SAE1Q9UBE0 346 aaPredicted RBP8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 SERGEFQ9UGK8 458 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 EIF2B4Q9UI10 523 aaKnown RBP8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 TRHDEQ9UKU6 1024 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 DNPEPQ9ULA0 475 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 PHTF1Q9UMS5 762 aa8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 ATXN2Q99700 1313 aaKnown RBP8.21□□□□□ -1.1
TM4SF1-204ENST00000493348 VPS13AQ96RL7 3174 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 TNRC6BQ9UPQ9 1833 aaKnown RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 RIF1Q5UIP0 2472 aaKnown RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 GOLGA6L10A0A0M3HER8 536 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 A0A1W2PQU0 124 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 BCLAF3A2AJT9 711 aaKnown RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 RNF103O00237 685 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ENC1O14682 589 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 BCAT2O15382 392 aaPredicted RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 AP1G1O43747 822 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 LZTS3O60299 673 aaPredicted RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 HLA-DQB2P05538 268 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ELFN1P0C7U0 828 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PECAM1P16284 738 aaPredicted RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ITPKAP23677 461 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 CD86P42081 329 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PTGER3P43115 390 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 LMAN1P49257 510 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 AFF3P51826 1226 aaKnown RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 DSC2Q02487 901 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 SPEM2Q0P670 501 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PRKD1Q15139 912 aaPredicted RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 UGP2Q16851 508 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 TRIM61Q5EBN2 209 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PIP5KL1Q5T9C9 394 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 AADACL2Q6P093 401 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ARHGEF18Q6ZSZ5 1173 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 B4GALNT4Q76KP1 1039 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 GSTA5Q7RTV2 222 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ALYREFQ86V81 257 aaKnown RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 TRIM69Q86WT6 500 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 HORMAD1Q86X24 394 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 SLC13A5Q86YT5 568 aaPredicted RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 REXO1L1PQ8IX06 675 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 SLC35F6Q8N357 371 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ZCCHC9Q8N567 271 aaKnown RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 CCDC89Q8N998 374 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 LRRN4Q8WUT4 740 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 BIRC7Q96CA5 298 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 SERAC1Q96JX3 654 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PHOX2BQ99453 314 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 FSD1LQ9BXM9 530 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 CEP41Q9BYV8 373 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 SLC25A51Q9H1U9 297 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 KCTD5Q9NXV2 234 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 RSPH14Q9UHP6 348 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ZNF148Q9UQR1 794 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 DMTF1Q9Y222 760 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PCDHB9Q9Y5E1 797 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 PCDHGC4Q9Y5F7 938 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 RAI2Q9Y5P3 530 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 FAM186AA6NE01 2351 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 DOCK9Q9BZ29 2069 aa8.2□□□□□ -1.1
TM4SF1-204ENST00000493348 ADAMTS9Q9P2N4 1935 aa8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 PTPRZ1P23471 2315 aaPredicted RBP8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 TP53BP1Q12888 1972 aaPredicted RBP8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 WDR87Q6ZQQ6 2873 aa8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 A0A1W2PPC4 97 aa8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 TTC24A2A3L6 582 aaPredicted RBP8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 CTAGE9A4FU28 777 aa8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 PRAMEF26H0Y7S4 382 aa8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 FPGTO14772 594 aa8.19□□□□□ -1.1
TM4SF1-204ENST00000493348 MUSKO15146 869 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms