RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ITM2BQ9Y287 266 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 EFR3BQ9Y2G0 817 aa12.91□□□□□ -0.34
CLIP2-209ENST00000493166 SPTBN4Q9H254 2564 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 TSPAN11A1L157 253 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 DDX3YO15523 660 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 TSPAN6O43657 245 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SOCS5O75159 536 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 JCHAINP01591 159 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SYPP08247 313 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 PYGMP11217 842 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 TIMP2P16035 220 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ENGP17813 658 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SUOXP51687 545 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 RPS21P63220 83 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 IFI35P80217 286 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ARHGAP8P85298 464 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ZNF211Q13398 564 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 TEAD4Q15561 434 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 UGP2Q16851 508 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SEL1L3Q68CR1 1132 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 BBS12Q6ZW61 710 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 B4GALNT4Q76KP1 1039 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ADAT2Q7Z6V5 191 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 PDCD6IPQ8WUM4 868 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 TFB1MQ8WVM0 346 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 KLK6Q92876 244 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 HES6Q96HZ4 224 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SERAC1Q96JX3 654 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SLC6A18Q96N87 628 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ORAI3Q9BRQ5 295 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 EBF2Q9HAK2 575 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 AASDHPPTQ9NRN7 309 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 RXFP3Q9NSD7 469 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 GGT7Q9UJ14 662 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 ZFR2Q9UPR6 939 aaKnown RBP12.9□□□□□ -0.34
CLIP2-209ENST00000493166 DMTF1Q9Y222 760 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 SLCO1B1Q9Y6L6 691 aa12.9□□□□□ -0.34
CLIP2-209ENST00000493166 TDRD6O60522 2096 aaKnown RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 DCHS1Q96JQ0 3298 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 APOC4-APOC2K7ER74 178 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 AREL1O15033 823 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 SPINT1O43278 529 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 GDF9O60383 454 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 TJP3O95049 919 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 APOC2P02655 101 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 PRLRP16471 622 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 CES1P23141 567 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 GRIA4P48058 902 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ATXN3P54252 364 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 POLR2LP62875 67 aaKnown RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 RACK1P63244 317 aaKnown RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 DSC2Q02487 901 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ELP6Q0PNE2 266 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ZBTB17Q13105 803 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 PRKD1Q15139 912 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ALG1LQ6GMV1 187 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 NAPEPLDQ6IQ20 393 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 AADACL2Q6P093 401 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ERAP2Q6P179 960 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ZSCAN30Q86W11 494 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 UBE2Q2Q8WVN8 375 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ECHDC3Q96DC8 303 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 NSMCE3Q96MG7 304 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 IL12RB2Q99665 862 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 HERPUD2Q9BSE4 406 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 GTPBP2Q9BX10 602 aaKnown RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 CEP41Q9BYV8 373 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 KCNF1Q9H3M0 494 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 CDV3Q9UKY7 258 aaKnown RBP12.89□□□□□ -0.35
CLIP2-209ENST00000493166 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 PCDHGC4Q9Y5F7 938 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 DNAH14Q0VDD8 3507 aa12.89□□□□□ -0.35
CLIP2-209ENST00000493166 A0A1B0GVT2 93 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 A0A1W2PQ67 120 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 IGLON5A6NGN9 336 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 HACD1B0YJ81 288 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 PRAMEF26H0Y7S4 382 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 H7C0C1 242 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 SLC31A1O15431 190 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 MTSS1O43312 755 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 HTRA2O43464 458 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-209ENST00000493166 CPP00450 1065 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 PRKCGP05129 697 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 ITIH2P19823 946 aa12.88□□□□□ -0.35
CLIP2-209ENST00000493166 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms