RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	OSBPL1A	Q9BXW6	950 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	CPEB1	Q9BZB8	566 aa	Known RBP	13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	EDEM3	Q9BZQ6	932 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	MAGEH1	Q9H213	219 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	TMEM248	Q9NWD8	314 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	PISD	Q9UG56	409 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	GPR34	Q9UPC5	381 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	DOLK	Q9UPQ8	538 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	OR1A2	Q9Y585	309 aa		13.85	□□□□□ -0.19
SAMM50-204	ENST00000493161	CXorf51A	A0A1B0GTR3	108 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	BUB1	O43683	1085 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ITGB6	P18564	788 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	WT1	P19544	449 aa	Predicted RBP	13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ITIH1	P19827	911 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ETFB	P38117	255 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ETV5	P41161	510 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	CSRP3	P50461	194 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	INHBC	P55103	352 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	NRG1	Q02297	640 aa	Predicted RBP	13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ELOC	Q15369	112 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	HSP90AA4P	Q58FG1	418 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ENPP7	Q6UWV6	458 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	TMPRSS9	Q7Z410	1059 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	VASH2	Q86V25	355 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	ZFAND4	Q86XD8	727 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	PYROXD2	Q8N2H3	581 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	FSTL5	Q8N475	847 aa	Predicted RBP	13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	JOSD2	Q8TAC2	188 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	SLC20A1	Q8WUM9	679 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	RXFP2	Q8WXD0	754 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	FUBP1	Q96AE4	644 aa	Known RBP	13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	SGF29	Q96ES7	293 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	GDAP1L1	Q96MZ0	367 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	NAA15	Q9BXJ9	866 aa	Known RBP	13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	FAM117A	Q9C073	453 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	TTYH3	Q9C0H2	523 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	LRRN3	Q9H3W5	708 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	IL17B	Q9UHF5	180 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	HPCAL4	Q9UM19	191 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	LRP4	O75096	1905 aa		13.84	□□□□□ -0.19
SAMM50-204	ENST00000493161	PRAMEF33	A0A0G2JMD5	474 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	PRAMEF10	O60809	474 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	RAMP2	O60895	175 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	PIGN	O95427	931 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	LSM8	O95777	96 aa	Known RBP	13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	PRKCG	P05129	697 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	PLEK	P08567	350 aa	Predicted RBP	13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	FAM87A	P0C7U9	286 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	CTSE	P14091	401 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	GEMIN4	P57678	1058 aa	Known RBP	13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	SRP54	P61011	504 aa	Known RBP	13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	CYP4F2	P78329	520 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	INPP5A	Q14642	412 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	LRRC14	Q15048	493 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	MAN2A1	Q16706	1144 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	TMEM52B	Q4KMG9	183 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	KLHDC7A	Q5VTJ3	777 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	SMYD5	Q6GMV2	418 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	LVRN	Q6Q4G3	990 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	ARC	Q7LC44	396 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	PLA2G15	Q8NCC3	412 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	TBC1D31	Q96DN5	1066 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	EXOC2	Q96KP1	924 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	APOO	Q9BUR5	198 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	C1QTNF7	Q9BXJ2	289 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	NDST4	Q9H3R1	872 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	STARD5	Q9NSY2	213 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	TMEM51	Q9NW97	253 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	FOXJ2	Q9P0K8	574 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	KIAA1468	Q9P260	1216 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	DKK3	Q9UBP4	350 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	LHX3	Q9UBR4	397 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	ACSL6	Q9UKU0	697 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	LOXL2	Q9Y4K0	774 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	SCN8A	Q9UQD0	1980 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	LRRK1	Q38SD2	2015 aa		13.83	□□□□□ -0.2
SAMM50-204	ENST00000493161	TOR1B	O14657	336 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	TERT	O14746	1132 aa	Known RBP	13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	RASGRP1	O95267	797 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	ALPI	P09923	528 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	JMJD7	P0C870	316 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	CCKBR	P32239	447 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	PEX5	P50542	639 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	BLK	P51451	505 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	HDAC4	P56524	1084 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	RHOA	P61586	193 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	EIF3I	Q13347	325 aa	Known RBP	13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	NFATC4	Q14934	902 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	CYTH1	Q15438	398 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	VWA3B	Q502W6	1294 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	ZSWIM9	Q86XI8	627 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	ZNF354C	Q86Y25	554 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	GPR156	Q8NFN8	814 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	SLC30A5	Q8TAD4	765 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	EPS8L1	Q8TE68	723 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	SCG3	Q8WXD2	468 aa	Known RBP	13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	OR1E3	Q8WZA6	343 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	HMCES	Q96FZ2	354 aa		13.82	□□□□□ -0.2
SAMM50-204	ENST00000493161	PDXP	Q96GD0	296 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms